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    LOC120297720 baculoviral IAP repeat-containing protein 3-like [ Crotalus tigris (Tiger rattlesnake) ]

    Gene ID: 120297720, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120297720
    Gene description
    baculoviral IAP repeat-containing protein 3-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Crotalus tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
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    Genomic context

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    See LOC120297720 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024100117.1 (298247..312559)

    NW_024100117.1Genomic Context describing neighboring genes Neighboring gene Yes1 associated transcriptional regulator Neighboring gene uncharacterized LOC120297721 Neighboring gene transmembrane protein 123 Neighboring gene matrix metallopeptidase 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024100117 Unplaced Scaffold Reference ASM1654583v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase inhibitor activity involved in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of necroptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    baculoviral IAP repeat-containing protein 3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1654583v1

    Genomic

    1. NW_024100117.1 Reference ASM1654583v1

      Range
      298247..312559
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039320680.1 → XP_039176614.1  baculoviral IAP repeat-containing protein 3-like isoform X1

      Conserved Domains (6) summary
      smart00238
      Location:294 → 362
      BIR; Baculoviral inhibition of apoptosis protein repeat
      cd00022
      Location:68 → 134
      BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
      cd08329
      Location:482 → 569
      CARD_BIRC2_BIRC3; Caspase activation and recruitment domain found in Baculoviral IAP repeat-containing proteins, BIRC2 (c-IAP1) and BIRC3 (c-IAP2)
      cd14394
      Location:417 → 462
      UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
      cd16713
      Location:590 → 643
      RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
      pfam00653
      Location:213 → 277
      BIR; Inhibitor of Apoptosis domain

    2. XM_039320683.1 → XP_039176617.1  baculoviral IAP repeat-containing protein 3-like isoform X2

      Conserved Domains (5) summary
      smart00238
      Location:131 → 199
      BIR; Baculoviral inhibition of apoptosis protein repeat
      cd08329
      Location:319 → 406
      CARD_BIRC2_BIRC3; Caspase activation and recruitment domain found in Baculoviral IAP repeat-containing proteins, BIRC2 (c-IAP1) and BIRC3 (c-IAP2)
      cd14394
      Location:254 → 299
      UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
      cd16713
      Location:427 → 480
      RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
      pfam00653
      Location:50 → 114
      BIR; Inhibitor of Apoptosis domain

    3. XM_039320682.1 → XP_039176616.1  baculoviral IAP repeat-containing protein 3-like isoform X1

      Conserved Domains (6) summary
      smart00238
      Location:294 → 362
      BIR; Baculoviral inhibition of apoptosis protein repeat
      cd00022
      Location:68 → 134
      BIR; Baculoviral inhibition of apoptosis protein repeat domain; Found in inhibitors of apoptosis proteins (IAPs) and other proteins. In higher eukaryotes, BIR domains inhibit apoptosis by acting as direct inhibitors of the caspase family of protease enzymes. ...
      cd08329
      Location:482 → 569
      CARD_BIRC2_BIRC3; Caspase activation and recruitment domain found in Baculoviral IAP repeat-containing proteins, BIRC2 (c-IAP1) and BIRC3 (c-IAP2)
      cd14394
      Location:417 → 462
      UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
      cd16713
      Location:590 → 643
      RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
      pfam00653
      Location:213 → 277
      BIR; Inhibitor of Apoptosis domain
    Nucleotide Protein
    Heading Accession and Version

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