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    LOC120348195 parathyroid hormone 2 receptor-like [ Styela clava ]

    Gene ID: 120348195, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120348195
    Gene description
    parathyroid hormone 2 receptor-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Styela clava
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Stolidobranchia; Styelidae; Styela
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    Genomic context

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    See LOC120348195 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM1312258v2 (GCF_013122585.1) Unplaced Scaffold NW_024102841.1 (13193545..13228913)

    NW_024102841.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 5-like Neighboring gene TLC domain-containing protein 4-A-like Neighboring gene uncharacterized Nudix hydrolase NudL-like Neighboring gene low-density lipoprotein receptor-related protein 2-like Neighboring gene ARF GTPase-activating protein GIT2-like Neighboring gene receptor-type tyrosine-protein phosphatase delta-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024102841 Unplaced Scaffold Reference ASM1312258v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptide hormone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    parathyroid hormone 2 receptor-like; parathyroid hormone/parathyroid hormone-related peptide receptor-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Styela clava Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1312258v2 Primary Assembly

    Genomic

    1. NW_024102841.1 Reference ASM1312258v2 Primary Assembly

      Range
      13193545..13228913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039418321.1 → XP_039274255.1  parathyroid hormone 2 receptor-like isoform X1

      Conserved Domains (2) summary
      smart00008
      Location:42 → 107
      HormR; Domain present in hormone receptors
      cd15265
      Location:130 → 423
      7tmB1_PTHR; parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors

    2. XM_039418322.1 → XP_039274256.1  parathyroid hormone 2 receptor-like isoform X2

      Conserved Domains (2) summary
      cd15265
      Location:125 → 418
      7tmB1_PTHR; parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors
      pfam02793
      Location:44 → 106
      HRM; Hormone receptor domain

    3. XM_039418323.1 → XP_039274257.1  parathyroid hormone/parathyroid hormone-related peptide receptor-like isoform X3

      Conserved Domains (1) summary
      cd15265
      Location:5 → 298
      7tmB1_PTHR; parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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