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    carm1 coactivator-associated arginine methyltransferase 1 [ Pimephales promelas (fathead minnow) ]

    Gene ID: 120490288, updated on 21-Mar-2024

    Summary

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    Gene symbol
    carm1
    Gene description
    coactivator-associated arginine methyltransferase 1
    Locus tag
    F2P79_003199
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pimephales promelas
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
    Orthologs
    human zebrafish all
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    Genomic context

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    See carm1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121321.1 (16894794..16909674)

    NW_024121321.1Genomic Context describing neighboring genes Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene uncharacterized LOC120490291 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene Yip1 domain family, member 2 Neighboring gene translocase of inner mitochondrial membrane 29

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024121321 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-arginine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-arginine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-arginine methyltransferase CARM1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EPA_FHM_2.0 Primary Assembly

    Genomic

    1. NW_024121321.1 Reference EPA_FHM_2.0 Primary Assembly

      Range
      16894794..16909674
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039687759.1 → XP_039543693.1  histone-arginine methyltransferase CARM1 isoform X1

      Conserved Domains (2) summary
      cd02440
      Location:169 → 270
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:15 → 119
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal

    2. XM_039687760.1 → XP_039543694.1  histone-arginine methyltransferase CARM1 isoform X2

      Conserved Domains (2) summary
      cd02440
      Location:169 → 270
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
      pfam11531
      Location:15 → 119
      CARM1; Coactivator-associated arginine methyltransferase 1 N terminal
    Nucleotide Protein
    Heading Accession and Version

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