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    DEHA2A13508g DEHA2A13508p [ Debaryomyces hansenii CBS767 ]

    Gene ID: 2899439, updated on 17-May-2024

    Summary

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    Gene symbol
    DEHA2A13508g
    Gene description
    DEHA2A13508p
    Locus tag
    DEHA2A13508g
    See related
    FungiDB:DEHA2A13508g; VEuPathDB:DEHA2A13508g
    Gene type
    protein coding
    RNA name
    DEHA2A13508p
    RefSeq status
    PROVISIONAL
    Organism
    Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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    Genomic context

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    See DEHA2A13508g in Genome Data Viewer
    Location:
    chromosome: A
    Exon count:
    1
    Sequence:
    Chromosome: A; NC_006043.2 (1130748..1132151)

    Chromosome A - NC_006043.2Genomic Context describing neighboring genes Neighboring gene DEHA2A13464p Neighboring gene DEHA2A13486p Neighboring gene DEHA2A13530p Neighboring gene DEHA2A13552p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006043.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II C-terminal domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II, holoenzyme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEHA2A13508p
    XP_456916.2
    • weakly similar to uniprot|Q05543 Saccharomyces cerevisiae YDR289C RTT103 Regulator of Ty1 Transposition

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006043.2 Reference assembly

      Range
      1130748..1132151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_456916.1 → XP_456916.2  DEHA2A13508p [Debaryomyces hansenii CBS767]

      See identical proteins and their annotated locations for XP_456916.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6BY03
      Conserved Domains (1) summary
      cl02544
      Location:8 → 128
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
    Nucleotide Protein
    Heading Accession and Version

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