The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bCygOlo1.pri.v2 Primary Assembly

Genomic

1. NC_049198.1 Reference bCygOlo1.pri.v2 Primary Assembly

   Range

   33596712..33701239

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_040542389.1 → XP_040398323.1  multiple PDZ domain protein isoform X16

   Conserved Domains (2) summary

   smart00228
   Location:1585 → 1669

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1057 → 1148

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

2. XM_040542369.1 → XP_040398303.1  multiple PDZ domain protein isoform X1

   Conserved Domains (3) summary

   smart00228
   Location:1694 → 1778

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1166 → 1257

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

3. XM_040542372.1 → XP_040398306.1  multiple PDZ domain protein isoform X2

   Conserved Domains (3) summary

   smart00228
   Location:1694 → 1778

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1166 → 1257

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

4. XM_040542379.1 → XP_040398313.1  multiple PDZ domain protein isoform X9

   Conserved Domains (3) summary

   smart00228
   Location:1632 → 1716

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1166 → 1257

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

5. XM_040542382.1 → XP_040398316.1  multiple PDZ domain protein isoform X11

   Conserved Domains (3) summary

   smart00228
   Location:1608 → 1692

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1166 → 1257

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

6. XM_040542384.1 → XP_040398318.1  multiple PDZ domain protein isoform X12

   Related

   ENSCOLP00015016169.1, ENSCOLT00015017680.1

   Conserved Domains (3) summary

   smart00228
   Location:1608 → 1692

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1166 → 1257

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

7. XM_040542390.1 → XP_040398324.1  multiple PDZ domain protein isoform X17

   Conserved Domains (3) summary

   smart00228
   Location:1571 → 1655

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1932 → 2015

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

8. XM_040542391.1 → XP_040398325.1  multiple PDZ domain protein isoform X18

   Related

   ENSCOLP00015016049.1, ENSCOLT00015017560.1

   Conserved Domains (3) summary

   smart00228
   Location:1571 → 1655

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1931 → 2014

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

9. XM_040542373.1 → XP_040398307.1  multiple PDZ domain protein isoform X3

   Conserved Domains (3) summary

   smart00228
   Location:1693 → 1777

   PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

   cd00992
   Location:1165 → 1256

   PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

   pfam09045
   Location:6 → 63

   L27_2

10. XM_040542401.1 → XP_040398335.1  multiple PDZ domain protein isoform X27

    Conserved Domains (3) summary

    smart00228
    Location:1693 → 1777

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1165 → 1256

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

11. XM_040542374.1 → XP_040398308.1  multiple PDZ domain protein isoform X4

    Conserved Domains (3) summary

    smart00228
    Location:1680 → 1764

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1152 → 1243

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

12. XM_040542386.1 → XP_040398320.1  multiple PDZ domain protein isoform X14

    Conserved Domains (3) summary

    smart00228
    Location:1594 → 1678

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1152 → 1243

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

13. XM_040542393.1 → XP_040398327.1  multiple PDZ domain protein isoform X20

    Conserved Domains (3) summary

    smart00228
    Location:1557 → 1641

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1917 → 2000

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

14. XM_040542375.1 → XP_040398309.1  multiple PDZ domain protein isoform X5

    Conserved Domains (3) summary

    smart00228
    Location:1679 → 1763

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1151 → 1242

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

15. XM_040542402.1 → XP_040398336.1  multiple PDZ domain protein isoform X28

    Conserved Domains (3) summary

    smart00228
    Location:1679 → 1763

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1151 → 1242

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

16. XM_040542385.1 → XP_040398319.1  multiple PDZ domain protein isoform X13

    Conserved Domains (3) summary

    smart00228
    Location:1593 → 1677

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1151 → 1242

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

17. XM_040542387.1 → XP_040398321.1  multiple PDZ domain protein isoform X15

    Conserved Domains (3) summary

    smart00228
    Location:1593 → 1677

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1151 → 1242

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

18. XM_040542394.1 → XP_040398328.1  multiple PDZ domain protein isoform X21

    Conserved Domains (3) summary

    smart00228
    Location:1556 → 1640

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1917 → 2000

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

19. XM_040542395.1 → XP_040398329.1  multiple PDZ domain protein isoform X22

    Conserved Domains (3) summary

    smart00228
    Location:1556 → 1640

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1916 → 1999

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

20. XM_040542378.1 → XP_040398312.1  multiple PDZ domain protein isoform X8

    Conserved Domains (3) summary

    smart00228
    Location:1655 → 1739

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1127 → 1218

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

21. XM_040542392.1 → XP_040398326.1  multiple PDZ domain protein isoform X19

    Related

    ENSCOLP00015016227.1, ENSCOLT00015017763.1

    Conserved Domains (3) summary

    smart00228
    Location:1569 → 1653

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1127 → 1218

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

22. XM_040542397.1 → XP_040398331.1  multiple PDZ domain protein isoform X24

    Conserved Domains (3) summary

    smart00228
    Location:1532 → 1616

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1892 → 1975

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

23. XM_040542396.1 → XP_040398330.1  multiple PDZ domain protein isoform X23

    Conserved Domains (3) summary

    smart00228
    Location:1555 → 1639

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1113 → 1204

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

24. XM_040542376.1 → XP_040398310.1  multiple PDZ domain protein isoform X6

    Conserved Domains (3) summary

    smart00228
    Location:1658 → 1742

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1130 → 1221

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

25. XM_040542398.1 → XP_040398332.1  multiple PDZ domain protein isoform X25

    Related

    ENSCOLP00015016085.1, ENSCOLT00015017596.1

    Conserved Domains (3) summary

    smart00228
    Location:1520 → 1604

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1880 → 1963

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 61

    L27_2

26. XM_040542380.1 → XP_040398314.1  multiple PDZ domain protein isoform X10

    Conserved Domains (3) summary

    smart00228
    Location:1618 → 1702

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1090 → 1181

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 61

    L27_2

27. XM_040542400.1 → XP_040398334.1  multiple PDZ domain protein isoform X26

    Related

    ENSCOLP00015016215.1, ENSCOLT00015017746.1

    Conserved Domains (3) summary

    smart00228
    Location:1481 → 1565

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1841 → 1924

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 61

    L27_2

28. XM_040542370.1 → XP_040398304.1  multiple PDZ domain protein isoform X1

    Conserved Domains (3) summary

    smart00228
    Location:1694 → 1778

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1166 → 1257

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

29. XM_040542381.1 → XP_040398315.1  multiple PDZ domain protein isoform X10

    Conserved Domains (3) summary

    smart00228
    Location:1618 → 1702

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1090 → 1181

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 61

    L27_2

30. XM_040542377.1 → XP_040398311.1  multiple PDZ domain protein isoform X7

    Conserved Domains (3) summary

    smart00228
    Location:1657 → 1741

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1129 → 1220

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 61

    L27_2

31. XM_040542371.1 → XP_040398305.1  multiple PDZ domain protein isoform X1

    Conserved Domains (3) summary

    smart00228
    Location:1694 → 1778

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1166 → 1257

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    pfam09045
    Location:6 → 63

    L27_2

32. XM_040542388.1 → XP_040398322.1  multiple PDZ domain protein isoform X16

    Conserved Domains (2) summary

    smart00228
    Location:1585 → 1669

    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2

    cd00992
    Location:1057 → 1148

    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...