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    L3MBTL1 l(3)mbt-like 1 (Drosophila) [ Gallus gallus (chicken) ]

    Gene ID: 419115, updated on 17-Aug-2024

    Summary

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    Official Symbol
    L3MBTL1provided by CGNC
    Official Full Name
    l(3)mbt-like 1 (Drosophila)provided by CGNC
    Primary source
    CGNC:652
    See related
    Ensembl:ENSGALG00010021341
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    L3MBTL
    Orthologs
    human mouse all
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    Genomic context

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    See L3MBTL1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (384595..422962, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (34671..73036, complement)

    Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417329 Neighboring gene immunoglobulin superfamily member 1 Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene uncharacterized LOC124417330

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lethal(3)malignant brain tumor-like protein 1
    Names
    H-l(3)mbt protein
    L(3)mbt protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396522.1 → NP_001383451.1  lethal(3)malignant brain tumor-like protein 1

      Status: VALIDATED

      Source sequence(s)
      BU350708, BX935638, JAENSK010000328
      UniProtKB/Swiss-Prot
      E1C2V1
      UniProtKB/TrEMBL
      A0A8V0ZQ35
      Related
      ENSGALP00010030848.1, ENSGALT00010051717.1
      Conserved Domains (2) summary
      cd09582
      Location:774 → 839
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:413 → 508
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      384595..422962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650797.2 → XP_040506731.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1C2V1
      UniProtKB/TrEMBL
      A0A8V0ZQ35
      Conserved Domains (2) summary
      cd09582
      Location:774 → 839
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:413 → 508
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    2. XM_040650798.2 → XP_040506732.1  lethal(3)malignant brain tumor-like protein 1 isoform X2

      UniProtKB/Swiss-Prot
      E1C2V1
      Conserved Domains (2) summary
      cd09582
      Location:771 → 836
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:410 → 505
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    3. XM_040650796.2 → XP_040506730.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1C2V1
      UniProtKB/TrEMBL
      A0A8V0ZQ35
      Conserved Domains (2) summary
      cd09582
      Location:774 → 839
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:413 → 508
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      34671..73036 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040687977.2 → XP_040543911.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1C2V1
      UniProtKB/TrEMBL
      A0A8V0ZQ35
      Conserved Domains (2) summary
      cd09582
      Location:774 → 839
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:413 → 508
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    2. XM_040687978.2 → XP_040543912.1  lethal(3)malignant brain tumor-like protein 1 isoform X2

      UniProtKB/Swiss-Prot
      E1C2V1
      Conserved Domains (2) summary
      cd09582
      Location:771 → 836
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:410 → 505
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

    3. XM_040687976.2 → XP_040543910.1  lethal(3)malignant brain tumor-like protein 1 isoform X1

      UniProtKB/Swiss-Prot
      E1C2V1
      UniProtKB/TrEMBL
      A0A8V0ZQ35
      Conserved Domains (2) summary
      cd09582
      Location:774 → 839
      SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
      smart00561
      Location:413 → 508
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1C2V1.1 GenPept UniProtKB/Swiss-Prot:E1C2V1

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