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    nAChRalpha6 nicotinic acetylcholine receptor alpha6 [ Drosophila elegans ]

    Gene ID: 108141715, updated on 23-May-2024

    Summary

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    Gene symbol
    nAChRalpha6
    Gene description
    nicotinic acetylcholine receptor alpha6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila elegans
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See nAChRalpha6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    102 current ASM1815250v1 (GCF_018152505.1) Unplaced Scaffold NW_024546167.1 (2703421..2786103, complement)
    101 previous assembly Dele_2.0 (GCF_000224195.1) Unplaced Scaffold NW_016083694.1 (2833757..2916416, complement)

    NW_024546167.1Genomic Context describing neighboring genes Neighboring gene alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 Neighboring gene zinc finger protein 236 Neighboring gene putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog Neighboring gene mitochondrial DNA helicase Neighboring gene cysteine-rich PDZ-binding protein Neighboring gene FK506-binding protein 59kD

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acetylcholine-gated monoatomic cation-selective channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acetylcholine receptor subunit alpha-type acr-16; neuronal acetylcholine receptor subunit alpha-7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila elegans Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815250v1

    Genomic

    1. NW_024546167.1 Reference ASM1815250v1

      Range
      2703421..2786103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017265205.2 → XP_017120694.1  neuronal acetylcholine receptor subunit alpha-7 isoform X8

    2. XM_041710648.1 → XP_041566582.1  acetylcholine receptor subunit alpha-type acr-16 isoform X4

      Conserved Domains (2) summary
      TIGR00860
      Location:11 → 473
      LIC; Cation transporter family protein
      cd18997
      Location:55 → 221
      LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor

    3. XM_041710649.1 → XP_041566583.1  acetylcholine receptor subunit alpha-type acr-16 isoform X5

      Conserved Domains (1) summary
      TIGR00860
      Location:11 → 473
      LIC; Cation transporter family protein

    4. XM_017265203.1 → XP_017120692.1  acetylcholine receptor subunit alpha-type acr-16 isoform X7

    5. XM_017265200.1 → XP_017120689.1  neuronal acetylcholine receptor subunit alpha-7 isoform X2

    6. XM_017265202.1 → XP_017120691.1  acetylcholine receptor subunit alpha-type acr-16 isoform X6

    7. XM_017265204.2 → XP_017120693.1  neuronal acetylcholine receptor subunit alpha-7 isoform X1

    8. XM_017265201.1 → XP_017120690.1  neuronal acetylcholine receptor subunit alpha-7 isoform X3

    9. XM_017265206.1 → XP_017120695.1  acetylcholine receptor subunit alpha-type acr-16 isoform X12

    10. XM_017265207.1 → XP_017120696.1  neuronal acetylcholine receptor subunit alpha-7 isoform X13

    11. XM_041710651.1 → XP_041566585.1  acetylcholine receptor subunit alpha-type acr-16 isoform X10

      Conserved Domains (1) summary
      TIGR00860
      Location:10 → 281
      LIC; Cation transporter family protein

    12. XM_041710650.1 → XP_041566584.1  neuronal acetylcholine receptor subunit alpha-7 isoform X9

      Conserved Domains (2) summary
      cd18997
      Location:55 → 236
      LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor
      cd19051
      Location:238 → 301
      LGIC_TM_cation; transmembrane domain of Cys-loop neurotransmitter-gated ion channels, includes 5HT3, nAChR, and ZAC

    13. XM_041710652.1 → XP_041566586.1  neuronal acetylcholine receptor subunit alpha-7 isoform X11

      Conserved Domains (1) summary
      cd18997
      Location:55 → 181
      LGIC_ECD_nAChR; extracellular domain of nicotinic acetylcholine receptor
    Nucleotide Protein
    Heading Accession and Version

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