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    Ca-alpha1D Ca[2+]-channel protein alpha[[1]] subunit D [ Drosophila elegans ]

    Gene ID: 108150477, updated on 16-May-2024

    Summary

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    Gene symbol
    Ca-alpha1D
    Gene description
    Ca[2+]-channel protein alpha[[1]] subunit D
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila elegans
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See Ca-alpha1D in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    102 current ASM1815250v1 (GCF_018152505.1) Unplaced Scaffold NW_024546167.1 (8607684..8632705)
    101 previous assembly Dele_2.0 (GCF_000224195.1) Unplaced Scaffold NW_016083089.1 (1187883..1212908, complement)

    NW_024546167.1Genomic Context describing neighboring genes Neighboring gene protein CDV3 homolog Neighboring gene uncharacterized LOC108150439 Neighboring gene uncharacterized LOC108150432 Neighboring gene Ca[2+] channel Muscle-specific alpha2/delta subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables high voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent calcium channel type D subunit alpha-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila elegans Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815250v1

    Genomic

    1. NW_024546167.1 Reference ASM1815250v1

      Range
      8607684..8632705
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017278673.2 → XP_017134162.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X1

    2. XM_017278674.2 → XP_017134163.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X2

    3. XM_017278681.2 → XP_017134170.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X8

    4. XM_017278675.2 → XP_017134164.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X4

    5. XM_017278676.2 → XP_017134165.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X5

    6. XM_041710663.1 → XP_041566597.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X3

      Conserved Domains (1) summary
      smart01062
      Location:2244 → 2274
      Ca_chan_IQ; Voltage gated calcium channel IQ domain

    7. XM_017278678.1 → XP_017134167.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X6

    8. XM_017278679.2 → XP_017134168.1  voltage-dependent calcium channel type D subunit alpha-1 isoform X7

    RNA

    1. XR_005977921.1 RNA Sequence

    2. XR_005977922.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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