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    dclk2a doublecortin-like kinase 2a [ Chelmon rostratus (copperband butterflyfish) ]

    Gene ID: 121603803, updated on 22-Mar-2024

    Summary

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    Gene symbol
    dclk2a
    Gene description
    doublecortin-like kinase 2a
    See related
    EnsemblRapid:ENSCRTG00005017617
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chelmon rostratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae; Chelmon
    Orthologs
    human zebrafish all
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    Genomic context

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    See dclk2a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current fCheRos1.pri (GCF_017976325.1) 3 NC_055660.1 (4170484..4212603)

    Chromosome 3 - NC_055660.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 10 Neighboring gene nuclear receptor subfamily 3, group C, member 2 Neighboring gene LPS responsive beige-like anchor protein Neighboring gene mab-21-like 2 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene ribosomal protein S3A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_055660.1 Chromosome 3 Reference fCheRos1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase DCLK2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chelmon rostratus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fCheRos1.pri Primary Assembly

    Genomic

    1. NC_055660.1 Reference fCheRos1.pri Primary Assembly

      Range
      4170484..4212603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041933034.1 → XP_041788968.1  serine/threonine-protein kinase DCLK2 isoform X1

      Conserved Domains (3) summary
      cd17069
      Location:189 → 272
      DCX2; Dublecortin-like domain 2
      cl21453
      Location:417 → 675
      PKc_like; Protein Kinases, catalytic domain
      cl28922
      Location:65 → 149
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_041933035.1 → XP_041788969.1  serine/threonine-protein kinase DCLK2 isoform X2

      Related
      ENSCRTP00005045298.1, ENSCRTT00005045596.1
      Conserved Domains (3) summary
      cd17069
      Location:189 → 272
      DCX2; Dublecortin-like domain 2
      cl21453
      Location:416 → 674
      PKc_like; Protein Kinases, catalytic domain
      cl28922
      Location:65 → 149
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    3. XM_041933036.1 → XP_041788970.1  serine/threonine-protein kinase DCLK2 isoform X3

      Conserved Domains (3) summary
      cd17069
      Location:189 → 272
      DCX2; Dublecortin-like domain 2
      cl21453
      Location:408 → 666
      PKc_like; Protein Kinases, catalytic domain
      cl28922
      Location:65 → 149
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_041933037.1 → XP_041788971.1  serine/threonine-protein kinase DCLK2 isoform X4

      Conserved Domains (3) summary
      cd17069
      Location:189 → 272
      DCX2; Dublecortin-like domain 2
      cl21453
      Location:407 → 665
      PKc_like; Protein Kinases, catalytic domain
      cl28922
      Location:65 → 149
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    RNA

    1. XR_006006713.1 RNA Sequence

      Related
      ENSCRTT00005045591.1
    Nucleotide Protein
    Heading Accession and Version

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