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    arvcfb ARVCF delta catenin family member b [ Hemibagrus wyckioides ]

    Gene ID: 131343392, updated on 28-Mar-2024

    Summary

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    Gene symbol
    arvcfb
    Gene description
    ARVCF delta catenin family member b
    Locus tag
    KOW79_018370
    See related
    EnsemblRapid:ENSHWYG00000023132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hemibagrus wyckioides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Bagridae; Hemibagrus
    Orthologs
    human zebrafish all
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    Genomic context

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    See arvcfb in Genome Data Viewer
    Location:
    chromosome: LG22
    Exon count:
    22
    Annotation release Status Assembly LG Location
    RS_2023_07 current SWU_Hwy_1.0 (GCF_019097595.1) LG22 NC_080731.1 (18154076..18299630)

    Linkage Group LG22 - NC_080731.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 181 Neighboring gene transmembrane protein 150Aa Neighboring gene transport and golgi organization 2 homolog (Drosophila) Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 1 Neighboring gene endoplasmic reticulum aminopeptidase 1b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_080731.1 Chromosome LG22 Reference SWU_Hwy_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ARVCF delta catenin family member b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_019097595.1-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SWU_Hwy_1.0 Primary Assembly

    Genomic

    1. NC_080731.1 Reference SWU_Hwy_1.0 Primary Assembly

      Range
      18154076..18299630
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058375052.1 → XP_058231035.1  ARVCF delta catenin family member b isoform X6

    2. XM_058375047.1 → XP_058231030.1  ARVCF delta catenin family member b isoform X1

      Related
      ENSHWYP00000048897.1, ENSHWYT00000053049.1

    3. XM_058375050.1 → XP_058231033.1  ARVCF delta catenin family member b isoform X4

    4. XM_058375049.1 → XP_058231032.1  ARVCF delta catenin family member b isoform X3

    5. XM_058375048.1 → XP_058231031.1  ARVCF delta catenin family member b isoform X2

      Related
      ENSHWYP00000048914.1, ENSHWYT00000053066.1

    6. XM_058375051.1 → XP_058231034.1  ARVCF delta catenin family member b isoform X5

      Related
      ENSHWYP00000048878.1, ENSHWYT00000053030.1

    7. XM_058375053.1 → XP_058231036.1  ARVCF delta catenin family member b isoform X7

      Related
      ENSHWYP00000048868.1, ENSHWYT00000053020.1
    Nucleotide Protein
    Heading Accession and Version

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