U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC122312004 protein WHAT'S THIS FACTOR 9, mitochondrial [ Carya illinoinensis ]

    Gene ID: 122312004, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC122312004
    Gene description
    protein WHAT'S THIS FACTOR 9, mitochondrial
    Locus tag
    CIPAW_05G005600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC122312004 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 5 NC_056756.1 (884343..887379, complement)

    Chromosome 5 - NC_056756.1Genomic Context describing neighboring genes Neighboring gene probable sodium/metabolite cotransporter BASS1, chloroplastic Neighboring gene ion channel DMI1 Neighboring gene metallothiol transferase FosB-like Neighboring gene uncharacterized protein At5g49945 Neighboring gene WEB family protein At3g51220-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_056756.1 Chromosome 5 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein WHAT'S THIS FACTOR 9, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056756.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      884343..887379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043126816.1 → XP_042982750.1  protein WHAT'S THIS FACTOR 9, mitochondrial

      UniProtKB/TrEMBL
      A0A8T1QDC1
      Conserved Domains (1) summary
      pfam11955
      Location:26 → 357
      PORR; Plant organelle RNA recognition domain

    2. XM_043126815.1 → XP_042982749.1  protein WHAT'S THIS FACTOR 9, mitochondrial

      UniProtKB/TrEMBL
      A0A8T1QDC1
      Conserved Domains (1) summary
      pfam11955
      Location:26 → 357
      PORR; Plant organelle RNA recognition domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.