U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC122312005 MDIS1-interacting receptor like kinase 2-like [ Carya illinoinensis ]

    Gene ID: 122312005, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC122312005
    Gene description
    MDIS1-interacting receptor like kinase 2-like
    Locus tag
    CIPAW_05G167000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC122312005 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 5 NC_056756.1 (27722231..27725824, complement)

    Chromosome 5 - NC_056756.1Genomic Context describing neighboring genes Neighboring gene tricalbin-3-like Neighboring gene uncharacterized LOC122311444 Neighboring gene large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic Neighboring gene alanine--tRNA ligase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_056756.1 Chromosome 5 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. RNA-Seq Analysis of Developing Pecan (Carya illinoinensis) Embryos Reveals Parallel Expression Patterns among Allergen and Lipid Metabolism Genes. Mattison CP, et al. J Agric Food Chem, 2017 Feb 22. PMID 28121438

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    MDIS1-interacting receptor like kinase 2-like; probable leucine-rich repeat receptor-like protein kinase At1g35710

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056756.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      27722231..27725824 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043126817.1 → XP_042982751.1  probable leucine-rich repeat receptor-like protein kinase At1g35710 isoform X1

      UniProtKB/TrEMBL
      A0A8T1QKX7, A0A922F0G0
      Conserved Domains (4) summary
      PLN00113
      Location:60 → 760
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00031
      Location:348 → 368
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:130 → 153
      LRR_RI; leucine-rich repeat [structural motif]
      cl21453
      Location:495 → 758
      PKc_like; Protein Kinases, catalytic domain

    2. XM_043126820.1 → XP_042982754.1  MDIS1-interacting receptor like kinase 2-like isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:108 → 371
      PKc_like; Protein Kinases, catalytic domain

    3. XM_043126818.1 → XP_042982752.1  MDIS1-interacting receptor like kinase 2-like isoform X2

      Conserved Domains (1) summary
      cl21453
      Location:180 → 443
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.