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    LOC122293024 MLO-like protein 3 [ Carya illinoinensis ]

    Gene ID: 122293024, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC122293024
    Gene description
    MLO-like protein 3
    Locus tag
    CIPAW_13G108800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Carya illinoinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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    Genomic context

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    See LOC122293024 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 13 NC_056764.1 (13705700..13713636, complement)

    Chromosome 13 - NC_056764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122290968 Neighboring gene auxin response factor 4 Neighboring gene MLO-like protein 6 Neighboring gene protein transport protein Sec61 subunit beta-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056764.1 Chromosome 13 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptomic Analysis Provides Insights into Grafting Union Development in Pecan (Carya illinoinensis). Mo Z, et al. Genes (Basel), 2018 Feb 5. PMID 29401757, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MLO-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.illinoinensisPawnee_v1 Primary Assembly

    Genomic

    1. NC_056764.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

      Range
      13705700..13713636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043101635.1 → XP_042957569.1  MLO-like protein 3

      UniProtKB/TrEMBL
      A0A8T1NR99, A0A922DC92

    2. XM_043101634.1 → XP_042957568.1  MLO-like protein 3

      UniProtKB/TrEMBL
      A0A8T1NR99, A0A922DC92
    Nucleotide Protein
    Heading Accession and Version

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