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    LOC122625534 60S ribosomal protein L38 [ Drosophila teissieri ]

    Gene ID: 122625534, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC122625534
    Gene description
    60S ribosomal protein L38
    See related
    EnsemblRapid:LOC122625534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila teissieri
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
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    Genomic context

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    See LOC122625534 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current Prin_Dtei_1.1 (GCF_016746235.2) Unplaced Scaffold NW_025224988.1 (101771..102301)

    NW_025224988.1Genomic Context describing neighboring genes Neighboring gene repressor of RNA polymerase III transcription MAF1 homolog Neighboring gene uncharacterized LOC122625535

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025224988 Unplaced Scaffold Reference Prin_Dtei_1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein-RNA complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila teissieri Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dtei_1.1

    Genomic

    1. NW_025224988.1 Reference Prin_Dtei_1.1

      Range
      101771..102301
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043805627.1 → XP_043661562.1  60S ribosomal protein L38

      Related
      XP_043661562.1, XM_043805627.1
      Conserved Domains (1) summary
      pfam01781
      Location:2 → 68
      Ribosomal_L38e; Ribosomal L38e protein family
    Nucleotide Protein Strain
    Heading Accession and Version

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