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    LOC109538968 G patch domain-containing protein 4 [ Dendroctonus ponderosae (mountain pine beetle) ]

    Gene ID: 109538968, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC109538968
    Gene description
    G patch domain-containing protein 4
    Locus tag
    HUJ05_010191
    See related
    EnsemblRapid:LOC109538968
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dendroctonus ponderosae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Scolytinae; Dendroctonus
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC109538968 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Dpon_F_20191213v2 (GCF_020466585.1) Unplaced Scaffold NW_026018165.1 (9861382..9864277, complement)
    100 previous assembly DendPond_male_1.0 (GCF_000355655.1) Unplaced Scaffold NW_017852083.1 (733418..736397)

    NW_026018165.1Genomic Context describing neighboring genes Neighboring gene 6-phosphogluconolactonase Neighboring gene uncharacterized LOC109538970 Neighboring gene scoloptoxin SSD14-like Neighboring gene scoloptoxin SSD14 Neighboring gene uncharacterized LOC109538960 Neighboring gene nuclear protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome and full-length cDNA resources for the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major insect pest of pine forests. Keeling CI, et al. Insect Biochem Mol Biol, 2012 Aug. PMID 22516182
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G patch domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dendroctonus ponderosae Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dpon_F_20191213v2

    Genomic

    1. NW_026018165.1 Reference Dpon_F_20191213v2

      Range
      9861382..9864277 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019906441.2 → XP_019762000.2  G patch domain-containing protein 4

      UniProtKB/TrEMBL
      U4UHF8
    Nucleotide Protein
    Heading Accession and Version

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