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    AOB57_RS01655 tetratricopeptide repeat protein [ Methanosarcina flavescens ]

    Gene ID: 53686792, updated on 2-Nov-2022

    Summary

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    Gene symbol
    AOB57_RS01655
    Gene description
    tetratricopeptide repeat protein
    Locus tag
    AOB57_RS01655
    Gene type
    protein coding
    Organism
    Methanosarcina flavescens (strain: E03.2, culture-collection: DSM:100822, type-material: type strain of Methanosarcina flavescens)
    Lineage
    Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
    Old locus tag
    AOB57_001655
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    Genomic context

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    NZ_CP032683.1Genomic Context describing neighboring genes Neighboring gene tripartite tricarboxylate transporter permease Neighboring gene DUF169 domain-containing protein Neighboring gene PASTA domain-containing protein Neighboring gene tetratricopeptide repeat protein Neighboring gene carbon monoxide dehydrogenase accessory protein CooC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP032683.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tetratrico peptide repeat interactions: to TPR or not to TPR? Lamb JR, et al. Trends Biochem Sci, 1995 Jul. PMID 7667876
    2. The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. Das AK, et al. EMBO J, 1998 Mar 2. PMID 9482716, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP032683.1 Reference assembly

      Range
      384385..385671
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_226999584.1 tetratricopeptide repeat protein [Methanosarcina flavescens]

      Conserved Domains (2) summary
      TIGR02917
      Location:195 → 403
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:236 → 264
      TPR; TPR repeat [structural motif]