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    LOC124033572 sodium-dependent noradrenaline transporter-like [ Oncorhynchus gorbuscha (pink salmon) ]

    Gene ID: 124033572, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC124033572
    Gene description
    sodium-dependent noradrenaline transporter-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oncorhynchus gorbuscha
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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    Genomic context

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    See LOC124033572 in Genome Data Viewer
    Location:
    chromosome: LG04
    Exon count:
    15
    Annotation release Status Assembly LG Location
    100 current OgorEven_v1.0 (GCF_021184085.1) LG04 NC_060176.1 (5222355..5276809)

    Linkage Group LG04 - NC_060176.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase AMFR-like Neighboring gene dipeptidase 2-like Neighboring gene solute carrier family 12 member 4-like Neighboring gene lysophosphatidylcholine acyltransferase 2-like Neighboring gene 72 kDa type IV collagenase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_060176.1 Chromosome LG04 Reference OgorEven_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dopamine:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables norepinephrine:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dopamine uptake involved in synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in norepinephrine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in presynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-dependent noradrenaline transporter-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oncorhynchus gorbuscha Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OgorEven_v1.0 Primary Assembly

    Genomic

    1. NC_060176.1 Reference OgorEven_v1.0 Primary Assembly

      Range
      5222355..5276809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046345627.1 → XP_046201583.1  sodium-dependent noradrenaline transporter-like

    Nucleotide Protein
    Heading Accession and Version

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