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    LOC102630997 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [ Citrus sinensis (sweet orange) ]

    Gene ID: 102630997, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC102630997
    Gene description
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
    Locus tag
    KPL70_002221
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
    Also known as
    DHNAT1
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    Genomic context

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    See LOC102630997 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current DVS_A1.0 (GCF_022201045.2) 1 NC_068556.1 (24802262..24803328, complement)
    102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 9 NC_023054.1 (45807..46942)

    Chromosome 1 - NC_068556.1Genomic Context describing neighboring genes Neighboring gene guanosine deaminase Neighboring gene hypothetical protein Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phylloquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DVS_A1.0 Primary Assembly

    Genomic

    1. NC_068556.1 Reference DVS_A1.0 Primary Assembly

      Range
      24802262..24803328 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006488640.4 → XP_006488703.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

      Conserved Domains (1) summary
      cl00509
      Location:20 → 181
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    Nucleotide Protein
    Heading Accession and Version

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