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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_054762.1 RefSeqGene
- Range
-
5022..19602
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001290331.2 → NP_001277260.1 DENN domain-containing protein 1C isoform 2
See identical proteins and their annotated locations for NP_001277260.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and the 5' coding region and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform 2, which has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK303226, BC033437, BE674790
- Consensus CDS
-
CCDS77225.1
- UniProtKB/Swiss-Prot
-
Q8IV53
- Related
- ENSP00000437805.1, ENST00000543576.5
- Conserved Domains (3) summary
-
- smart00801
Location:281 → 347
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:49 → 249
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:1 → 43
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
NM_024898.4 → NP_079174.2 DENN domain-containing protein 1C isoform 1
See identical proteins and their annotated locations for NP_079174.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
BC033437, BE674790, DC378383
- Consensus CDS
-
CCDS45938.1
- UniProtKB/Swiss-Prot
- B4E051, D3PFD4, Q8IV53, Q8NDB1, Q9H5Z2
- Related
- ENSP00000370889.1, ENST00000381480.7
- Conserved Domains (3) summary
-
- smart00801
Location:325 → 391
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:93 → 293
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:13 → 87
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
6467207..6481787 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011528318.3 → XP_011526620.1 DENN domain-containing protein 1C isoform X4
See identical proteins and their annotated locations for XP_011526620.1
- UniProtKB/Swiss-Prot
-
Q8IV53
- Conserved Domains (3) summary
-
- smart00801
Location:281 → 347
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:49 → 249
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:1 → 43
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_006722906.4 → XP_006722969.1 DENN domain-containing protein 1C isoform X4
See identical proteins and their annotated locations for XP_006722969.1
- UniProtKB/Swiss-Prot
-
Q8IV53
- Conserved Domains (3) summary
-
- smart00801
Location:281 → 347
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:49 → 249
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:1 → 43
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
-
XM_047439458.1 → XP_047295414.1 DENN domain-containing protein 1C isoform X3
-
XM_006722905.4 → XP_006722968.3 DENN domain-containing protein 1C isoform X2
- Conserved Domains (4) summary
-
- smart00799
Location:230 → 430
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:150 → 224
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- pfam03455
Location:452 → 503
- dDENN; dDENN domain
- pfam11702
Location:706 → 888
- DUF3295; Protein of unknown function (DUF3295)
-
XM_024451727.2 → XP_024307495.1 DENN domain-containing protein 1C isoform X1
- Conserved Domains (4) summary
-
- smart00801
Location:462 → 528
- dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
- smart00799
Location:230 → 430
- DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
- smart00800
Location:150 → 224
- uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
- pfam11702
Location:748 → 930
- DUF3295; Protein of unknown function (DUF3295)
-
XM_047439459.1 → XP_047295415.1 DENN domain-containing protein 1C isoform X5
- Related
-
ENST00000590818.5
-
XM_047439460.1 → XP_047295416.1 DENN domain-containing protein 1C isoform X6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
6456694..6471589 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322208.1 → XP_054178183.1 DENN domain-containing protein 1C isoform X7
-
XM_054322209.1 → XP_054178184.1 DENN domain-containing protein 1C isoform X8
-
XM_054322211.1 → XP_054178186.1 DENN domain-containing protein 1C isoform X4
-
XM_054322212.1 → XP_054178187.1 DENN domain-containing protein 1C isoform X4
-
XM_054322210.1 → XP_054178185.1 DENN domain-containing protein 1C isoform X3
-
XM_054322213.1 → XP_054178188.1 DENN domain-containing protein 1C isoform X5