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    Dtna dystrobrevin alpha [ Marmota marmota marmota (Alpine marmot) ]

    Gene ID: 107139550, updated on 14-Mar-2024

    Summary

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    Gene symbol
    Dtna
    Gene description
    dystrobrevin alpha
    See related
    Ensembl:ENSMMMG00000007833
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Marmota marmota marmota (sub-species: marmota)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
    Orthologs
    human mouse all
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    Genomic context

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    See Dtna in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999990.1 (30884065..31199745, complement)
    100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351220.1 (30884982..31137530, complement)

    NW_025999990.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein RP/EB family member 2 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC125617741 Neighboring gene nucleolar protein 4 Neighboring gene ASXL transcriptional regulator 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in synaptic signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dystrobrevin alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference marMar

    Genomic

    1. NW_025999990.1 Reference marMar

      Range
      30884065..31199745 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048806343.1 → XP_048662300.1  dystrobrevin alpha isoform X1

    2. XM_048806342.1 → XP_048662299.1  dystrobrevin alpha isoform X1

    3. XM_048806340.1 → XP_048662297.1  dystrobrevin alpha isoform X1

    4. XM_048806347.1 → XP_048662304.1  dystrobrevin alpha isoform X3

    5. XM_048806346.1 → XP_048662303.1  dystrobrevin alpha isoform X2

    6. XM_048806348.1 → XP_048662305.1  dystrobrevin alpha isoform X4

    7. XM_048806351.1 → XP_048662308.1  dystrobrevin alpha isoform X6

    8. XM_048806349.1 → XP_048662306.1  dystrobrevin alpha isoform X5

    9. XM_048806353.1 → XP_048662310.1  dystrobrevin alpha isoform X7

    10. XM_048806356.1 → XP_048662313.1  dystrobrevin alpha isoform X10

    11. XM_048806354.1 → XP_048662311.1  dystrobrevin alpha isoform X8

    12. XM_048806355.1 → XP_048662312.1  dystrobrevin alpha isoform X9

    13. XM_048806359.1 → XP_048662316.1  dystrobrevin alpha isoform X14

    14. XM_015482445.2 → XP_015337931.1  dystrobrevin alpha isoform X25

      Conserved Domains (4) summary
      cd02334
      Location:241 → 289
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      pfam09068
      Location:16 → 140
      EF-hand_2; EF hand
      pfam09069
      Location:144 → 232
      EF-hand_3; EF-hand
      pfam13874
      Location:467 → 550
      Nup54; Nucleoporin complex subunit 54

    15. XM_048806357.1 → XP_048662314.1  dystrobrevin alpha isoform X11

    16. XM_015482449.2 → XP_015337935.1  dystrobrevin alpha isoform X12

      Conserved Domains (4) summary
      cd02334
      Location:241 → 289
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      pfam09068
      Location:16 → 140
      EF-hand_2; EF hand
      pfam09069
      Location:144 → 232
      EF-hand_3; EF-hand
      pfam13874
      Location:410 → 493
      Nup54; Nucleoporin complex subunit 54

    17. XM_048806358.1 → XP_048662315.1  dystrobrevin alpha isoform X13

    18. XM_048806360.1 → XP_048662317.1  dystrobrevin alpha isoform X15

    19. XM_015482447.2 → XP_015337933.1  dystrobrevin alpha isoform X16

      UniProtKB/TrEMBL
      A0A8C5Z4Z6
      Related
      ENSMMMP00000008913.1
      Conserved Domains (4) summary
      COG0419
      Location:365 → 494
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      cd02334
      Location:241 → 289
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16249
      Location:54 → 214
      EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin
      cl39057
      Location:408 → 598
      MS_channel; Mechanosensitive ion channel

    20. XM_048806345.1 → XP_048662302.1  dystrobrevin alpha isoform X1

    21. XM_048806344.1 → XP_048662301.1  dystrobrevin alpha isoform X1

    22. XM_048806350.1 → XP_048662307.1  dystrobrevin alpha isoform X5

    23. XM_048806361.1 → XP_048662318.1  dystrobrevin alpha isoform X16

      UniProtKB/TrEMBL
      A0A8C5Z4Z6

    24. XM_048806352.1 → XP_048662309.1  dystrobrevin alpha isoform X6

    25. XM_048806362.1 → XP_048662319.1  dystrobrevin alpha isoform X17

    26. XM_048806363.1 → XP_048662320.1  dystrobrevin alpha isoform X18

    27. XM_048806364.1 → XP_048662321.1  dystrobrevin alpha isoform X19

    28. XM_048806367.1 → XP_048662324.1  dystrobrevin alpha isoform X20

    29. XM_048806368.1 → XP_048662325.1  dystrobrevin alpha isoform X21

    30. XM_048806370.1 → XP_048662327.1  dystrobrevin alpha isoform X22

    31. XM_048806366.1 → XP_048662323.1  dystrobrevin alpha isoform X19

    32. XM_048806371.1 → XP_048662328.1  dystrobrevin alpha isoform X22

    33. XM_048806369.1 → XP_048662326.1  dystrobrevin alpha isoform X21

    34. XM_048806372.1 → XP_048662329.1  dystrobrevin alpha isoform X23

    35. XM_015482448.2 → XP_015337934.1  dystrobrevin alpha isoform X24

      UniProtKB/TrEMBL
      A0A8C5Z3E9
      Related
      ENSMMMP00000008927.1
      Conserved Domains (2) summary
      cd02334
      Location:241 → 289
      ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
      cd16249
      Location:54 → 214
      EFh_DTNA; EF-hand-like motif found in alpha-dystrobrevin

    36. XM_048806373.1 → XP_048662330.1  dystrobrevin alpha isoform X23

    37. XM_048806374.1 → XP_048662331.1  dystrobrevin alpha isoform X24

      UniProtKB/TrEMBL
      A0A8C5Z3E9
    Nucleotide Protein
    Heading Accession and Version

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