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    AP1AR adaptor related protein complex 1 associated regulatory protein [ Orcinus orca (killer whale) ]

    Gene ID: 101280057, updated on 8-Mar-2024

    Summary

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    Gene symbol
    AP1AR
    Gene description
    adaptor related protein complex 1 associated regulatory protein
    See related
    EnsemblRapid:ENSOORG00010002111
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Orcinus orca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
    Orthologs
    human mouse all
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    Genomic context

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    See AP1AR in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 4 NC_064562.1 (126867527..126896917)

    Chromosome 4 - NC_064562.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 241 member A Neighboring gene uncharacterized LOC117201199 Neighboring gene TRAF interacting protein with forkhead associated domain Neighboring gene alpha kinase 1 Neighboring gene neurogenin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064562.1 Chromosome 4 Reference mOrcOrc1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables AP-1 adaptor complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of cell motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle targeting, trans-Golgi to endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-1 complex-associated regulatory protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mOrcOrc1.1 Primary Assembly

    Genomic

    1. NC_064562.1 Reference mOrcOrc1.1 Primary Assembly

      Range
      126867527..126896917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033427746.2 → XP_033283637.1  AP-1 complex-associated regulatory protein isoform X3

      Conserved Domains (1) summary
      pfam15745
      Location:26 → 302
      AP1AR; AP-1 complex-associated regulatory protein

    2. XM_033427744.2 → XP_033283635.1  AP-1 complex-associated regulatory protein isoform X1

      Conserved Domains (1) summary
      pfam15745
      Location:26 → 302
      AP1AR; AP-1 complex-associated regulatory protein

    3. XM_004269562.4 → XP_004269610.1  AP-1 complex-associated regulatory protein isoform X2

      Related
      ENSOORP00010002079.1, ENSOORT00010002879.1
      Conserved Domains (1) summary
      pfam15745
      Location:26 → 302
      AP1AR; AP-1 complex-associated regulatory protein

    4. XM_049709647.1 → XP_049565604.1  AP-1 complex-associated regulatory protein isoform X4

    5. XM_033427748.2 → XP_033283639.1  AP-1 complex-associated regulatory protein isoform X5

      Related
      ENSOORP00010002081.1, ENSOORT00010002881.1
      Conserved Domains (1) summary
      pfam15745
      Location:26 → 269
      AP1AR; AP-1 complex-associated regulatory protein

    6. XM_049709648.1 → XP_049565605.1  AP-1 complex-associated regulatory protein isoform X6

    Nucleotide Protein
    Heading Accession and Version

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