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    slc4a5a solute carrier family 4 member 5a [ Triplophysa dalaica ]

    Gene ID: 130419223, updated on 27-Mar-2024

    Summary

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    Gene symbol
    slc4a5a
    Gene description
    solute carrier family 4 member 5a
    See related
    EnsemblRapid:ENSTDLG00000008961
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Triplophysa dalaica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
    Orthologs
    zebrafish all
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    Genomic context

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    See slc4a5a in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 4 NC_079545.1 (18281262..18303059, complement)

    Chromosome 4 - NC_079545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130419396 Neighboring gene 2-oxoglutarate and iron-dependent oxygenase domain containing 2 Neighboring gene uncharacterized LOC130420231 Neighboring gene tachykinin receptor 1a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_079545.1 Chromosome 4 Reference ASM1584641v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monoatomic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:bicarbonate symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables solute:inorganic anion antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bicarbonate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    electrogenic sodium bicarbonate cotransporter 4
    Names
    solute carrier 4 member 5a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1584641v1 Primary Assembly

    Genomic

    1. NC_079545.1 Reference ASM1584641v1 Primary Assembly

      Range
      18281262..18303059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056745784.1 → XP_056601762.1  electrogenic sodium bicarbonate cotransporter 4

      Related
      ENSTDLP00000023298.1, ENSTDLT00000024507.1
    Nucleotide Protein
    Heading Accession and Version

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