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    LOC103650447 putative disease resistance protein RGA1 [ Zea mays ]

    Gene ID: 103650447, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC103650447
    Gene description
    putative disease resistance protein RGA1
    Locus tag
    ZEAMMB73_Zm00001d041362
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    rp3-1
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    Genomic context

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    See LOC103650447 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 3 NC_050098.1 (115341808..115348371, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 3 NC_024461.2 (114244601..114251164, complement)

    Chromosome 3 - NC_050098.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-1-like Neighboring gene uncharacterized protein Rv2082-like Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene wall-associated receptor kinase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative disease resistance protein RGA1
    Names
    putative rp3 protein
    resistance to Puccinia sorghi3
    rust resistance protein rp3-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050098.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      115341808..115348371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008676024.3 → XP_008674246.1  putative disease resistance protein RGA1

      See identical proteins and their annotated locations for XP_008674246.1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    2. XM_008676028.3 → XP_008674250.1  putative disease resistance protein RGA1

      See identical proteins and their annotated locations for XP_008674250.1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    3. XM_020550274.2 → XP_020405863.1  putative disease resistance protein RGA1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    4. XM_008676027.4 → XP_008674249.1  putative disease resistance protein RGA1

      See identical proteins and their annotated locations for XP_008674249.1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    5. XM_020550276.3 → XP_020405865.1  putative disease resistance protein RGA1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    6. XM_008676025.4 → XP_008674247.1  putative disease resistance protein RGA1

      See identical proteins and their annotated locations for XP_008674247.1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    7. XM_035966275.1 → XP_035822168.1  putative disease resistance protein RGA1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    8. XM_008676026.3 → XP_008674248.1  putative disease resistance protein RGA1

      See identical proteins and their annotated locations for XP_008674248.1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    9. XM_020550275.2 → XP_020405864.1  putative disease resistance protein RGA1

      UniProtKB/TrEMBL
      A0A1R3PIG0, A0A804N4T9
      Conserved Domains (4) summary
      PLN03210
      Location:597 → 772
      PLN03210; Resistant to P. syringae 6; Provisional
      sd00033
      Location:614 → 634
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00931
      Location:172 → 386
      NB-ARC; NB-ARC domain
      pfam18052
      Location:9 → 89
      Rx_N; Rx N-terminal domain

    RNA

    1. XR_002268059.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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