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    Erf ETS2 repressor factor [ Peromyscus californicus insignis ]

    Gene ID: 128125798, updated on 25-Mar-2024

    Summary

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    Gene symbol
    Erf
    Gene description
    ETS2 repressor factor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Peromyscus californicus insignis (sub-species: insignis)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
    Orthologs
    human mouse all
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    Genomic context

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    See Erf in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_02 current ASM782708v3 (GCF_007827085.1) Unplaced Scaffold NW_026294562.1 (172318561..172326080, complement)

    NW_026294562.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 526 Neighboring gene glycogen synthase kinase 3 alpha Neighboring gene uncharacterized LOC128125803 Neighboring gene capicua transcriptional repressor Neighboring gene platelet activating factor acetylhydrolase 1b catalytic subunit 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026294562 Unplaced Scaffold Reference ASM782708v3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: ETS domain-containing transcription factor ERF

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_007827085.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM782708v3

    Genomic

    1. NW_026294562.1 Reference ASM782708v3

      Range
      172318561..172326080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052763527.1 → XP_052619487.1  LOW QUALITY PROTEIN: ETS domain-containing transcription factor ERF

    Nucleotide Protein Strain
    Heading Accession and Version

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