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    LOC8070372 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [ Sorghum bicolor (sorghum) ]

    Gene ID: 8070372, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC8070372
    Gene description
    glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
    Locus tag
    SORBI_3008G016900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8070372 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 8 NC_012877.2 (1387195..1392661)

    Chromosome 8 - NC_012877.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8071427 Neighboring gene probable protein S-acyltransferase 1 Neighboring gene uncharacterized LOC110429642 Neighboring gene uncharacterized LOC110429733 Neighboring gene uncharacterized LOC110429894

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012877.2 Chromosome 8 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate derivative binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UDP-N-acetylglucosamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fructose 6-phosphate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012877.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      1387195..1392661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002441689.2 → XP_002441734.1  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2

      See identical proteins and their annotated locations for XP_002441734.1

      UniProtKB/TrEMBL
      A0A921QCL2, C5YQM9
      Conserved Domains (1) summary
      PLN02981
      Location:1 → 675
      PLN02981; glucosamine:fructose-6-phosphate aminotransferase
    Nucleotide Protein
    Heading Accession and Version

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