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    rpl30 ribosomal protein L30 [ Clarias gariepinus (North African catfish) ]

    Gene ID: 128518601, updated on 9-Jul-2024

    Summary

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    Gene symbol
    rpl30
    Gene description
    ribosomal protein L30
    See related
    EnsemblRapid:ENSCGSG00000025369
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Clarias gariepinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Clariidae; Clarias
    Orthologs
    human zebrafish all
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    Genomic context

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    See rpl30 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_03 current CGAR_prim_01v2 (GCF_024256425.1) 3 NC_071102.1 (29297730..29300572)

    Chromosome 3 - NC_071102.1Genomic Context describing neighboring genes Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene serine/threonine kinase 3 (STE20 homolog, yeast) Neighboring gene reactive intermediate imine deaminase A homolog Neighboring gene lysosomal protein transmembrane 4 beta Neighboring gene metadherin a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_071102.1 Chromosome 3 Reference CGAR_prim_01v2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_024256425.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CGAR_prim_01v2 Primary Assembly

    Genomic

    1. NC_071102.1 Reference CGAR_prim_01v2 Primary Assembly

      Range
      29297730..29300572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_053491768.1 → XP_053347743.1  60S ribosomal protein L30

      Related
      ENSCGSP00000061319.1, ENSCGST00000065031.1
    Nucleotide Protein
    Heading Accession and Version

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