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    LOC129530428 matrix-remodeling-associated protein 5-like [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 129530428, updated on 14-Mar-2024

    Summary

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    Gene symbol
    LOC129530428
    Gene description
    matrix-remodeling-associated protein 5-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
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    Genomic context

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    See LOC129530428 in Genome Data Viewer
    Location:
    chromosome: Y
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) Y NC_073248.2 (10673530..10713508)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) Y NC_073248.1 (10707467..10746200)

    Chromosome Y - NC_073248.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene argininosuccinate synthase-like Neighboring gene angiogenic factor with G patch and FHA domains 1-like Neighboring gene protein FRG1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to transforming growth factor beta IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular exosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: matrix-remodeling-associated protein 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073248.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      10673530..10713508
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055377254.2 → XP_055233229.1  LOW QUALITY PROTEIN: matrix-remodeling-associated protein 5-like

    Nucleotide Protein
    Heading Accession and Version

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