NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001131.3 → NP_001122.2 cysteine-rich secretory protein 1 isoform 1 precursor
See identical proteins and their annotated locations for NP_001122.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript and encodes the longer isoform (1). Variants 1 and 3 encode the same isoform.
- Source sequence(s)
-
AL359458
- Consensus CDS
-
CCDS4931.1
- UniProtKB/Swiss-Prot
- B5BU98, O00698, P54107, Q13248, Q14082, Q96SF6
- UniProtKB/TrEMBL
- A0A0K0K1I1, A8K8Y2
- Related
- ENSP00000338276.4, ENST00000335847.9
- Conserved Domains (2) summary
-
- cd05383
Location:39 → 177
- SCP_CRISP; SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a ...
- pfam08562
Location:195 → 249
- Crisp; Crisp
-
NM_001205220.2 → NP_001192149.1 cysteine-rich secretory protein 1 isoform 1 precursor
See identical proteins and their annotated locations for NP_001192149.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate 5' terminal non-coding exon, thus differs in the 5' UTR compared to variant 1. Variants 1 and 3 encode the same isoform (1).
- Source sequence(s)
-
AL359458, BC028577, X95237
- Consensus CDS
-
CCDS4931.1
- UniProtKB/Swiss-Prot
- B5BU98, O00698, P54107, Q13248, Q14082, Q96SF6
- UniProtKB/TrEMBL
- A0A0K0K1I1, A8K8Y2
- Related
- ENSP00000427589.1, ENST00000505118.1
- Conserved Domains (2) summary
-
- cd05383
Location:39 → 177
- SCP_CRISP; SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a ...
- pfam08562
Location:195 → 249
- Crisp; Crisp
-
NM_170609.2 → NP_733758.1 cysteine-rich secretory protein 1 isoform 2 precursor
See identical proteins and their annotated locations for NP_733758.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 3' coding region compared to variant 1. This results in a frame-shift, early translation termination, and a shorter isoform (2, also known as CRISP-1 delta) compared to isoform 1.
- Source sequence(s)
-
AL359458
- Consensus CDS
-
CCDS4932.1
- UniProtKB/Swiss-Prot
-
P54107
- Related
- ENSP00000425020.1, ENST00000507853.5
- Conserved Domains (1) summary
-
- cd05383
Location:39 → 178
- SCP_CRISP; SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
49834257..49877096 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017010320.3 → XP_016865809.1 cysteine-rich secretory protein 1 isoform X1
- Conserved Domains (2) summary
-
- pfam08562
Location:93 → 147
- Crisp; Crisp
- cl00133
Location:1 → 75
- SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...
-
XM_011514315.4 → XP_011512617.1 cysteine-rich secretory protein 1 isoform X1
- Conserved Domains (2) summary
-
- pfam08562
Location:93 → 147
- Crisp; Crisp
- cl00133
Location:1 → 75
- SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...
-
XM_017010321.3 → XP_016865810.1 cysteine-rich secretory protein 1 isoform X1
- Conserved Domains (2) summary
-
- pfam08562
Location:93 → 147
- Crisp; Crisp
- cl00133
Location:1 → 75
- SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
49676220..49719057 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354384.1 → XP_054210359.1 cysteine-rich secretory protein 1 isoform X1
-
XM_054354383.1 → XP_054210358.1 cysteine-rich secretory protein 1 isoform X1
-
XM_054354385.1 → XP_054210360.1 cysteine-rich secretory protein 1 isoform X1