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    LOC130378008 E3 ubiquitin-protein ligase SMURF1-like [ Gadus chalcogrammus (walleye pollock) ]

    Gene ID: 130378008, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC130378008
    Gene description
    E3 ubiquitin-protein ligase SMURF1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus chalcogrammus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_05 current NIFS_Gcha_1.0 (GCF_026213295.1) Unplaced Scaffold NW_026613475.1 (62882..79666)

    NW_026613475.1Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 1 Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene mucin-5AC-like Neighboring gene ring finger protein 216 Neighboring gene uncharacterized LOC130378010

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026613475 Unplaced Scaffold Reference NIFS_Gcha_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase SMURF1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_026213295.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NIFS_Gcha_1.0 Primary Assembly

    Genomic

    1. NW_026613475.1 Reference NIFS_Gcha_1.0 Primary Assembly

      Range
      62882..79666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056584949.1 → XP_056440924.1  E3 ubiquitin-protein ligase SMURF1-like

    Nucleotide Protein
    Heading Accession and Version