U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    scny ubiquitin specific peptidase 36 [ Drosophila mojavensis ]

    Gene ID: 6582504, updated on 12-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    scny
    Gene description
    ubiquitin specific peptidase 36
    Locus tag
    Dmoj_GI13361
    See related
    EnsemblRapid:LOC6582504
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mojavensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    Usp36; GI13361; GI13361-PB; GI13361-PC
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See scny in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318899.1 (14471783..14479370)
    101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979115.1 (11965551..11973004)

    NW_025318899.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6582502 Neighboring gene TOM1-like protein 2 Neighboring gene membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase Neighboring gene nucleolar protein viriato

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ubiquitin carboxyl-terminal hydrolase 36
    Names
    Deubiquitinating enzyme 36
    Dmoj\GI13361
    Dmoj\GI13361-PB
    Dmoj\GI13361-PC
    Protein scrawny
    Ubiquitin thioesterase 36
    Ubiquitin-specific-processing protease 36
    dmoj_GLEANR_13293

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815372v1

    Genomic

    1. NW_025318899.1 Reference ASM1815372v1

      Range
      14471783..14479370
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002008169.4 → XP_002008205.2  ubiquitin carboxyl-terminal hydrolase 36 isoform X2

      UniProtKB/Swiss-Prot
      B4KXJ5
      Related
      XP_002008205.2, XM_002008169.4
      Conserved Domains (2) summary
      cd02661
      Location:198 → 506
      Peptidase_C19E; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      pfam00443
      Location:199 → 506
      UCH; Ubiquitin carboxyl-terminal hydrolase

    2. XM_015162478.3 → XP_015017964.1  ubiquitin carboxyl-terminal hydrolase 36 isoform X1

      UniProtKB/Swiss-Prot
      B4KXJ5
      UniProtKB/TrEMBL
      A0A0Q9XQF5
      Related
      XP_015017964.1, XM_015162478.3
      Conserved Domains (2) summary
      cd02661
      Location:198 → 506
      Peptidase_C19E; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
      pfam00443
      Location:199 → 506
      UCH; Ubiquitin carboxyl-terminal hydrolase

    RNA

    1. XR_001449133.3 RNA Sequence

      Related
      XR_001449133.3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4KXJ5.1 GenPept UniProtKB/Swiss-Prot:B4KXJ5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.