U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Mab21l3 mab-21-like 3 [ Mus musculus (house mouse) ]

    Gene ID: 242125, updated on 2-Nov-2024

    Summary

    Official Symbol
    Mab21l3provided by MGI
    Official Full Name
    mab-21-like 3provided by MGI
    Primary source
    MGI:MGI:2446273
    See related
    Ensembl:ENSMUSG00000044313 AllianceGenome:MGI:2446273
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Orthologous to human MAB21L3 (mab-21 like 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 4.3), ovary adult (RPKM 1.8) and 10 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mab21l3 in Genome Data Viewer
    Location:
    3 F2.2; 3 44.3 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (101720392..101743601, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (101813076..101836283, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:101474732-101474841 Neighboring gene predicted gene, 33265 Neighboring gene STARR-seq mESC enhancer starr_08545 Neighboring gene STARR-seq mESC enhancer starr_08546 Neighboring gene STARR-seq mESC enhancer starr_08547 Neighboring gene predicted gene, 33309 Neighboring gene STARR-positive B cell enhancer ABC_E6090 Neighboring gene predicted gene, 33381 Neighboring gene solute carrier family 22 (organic anion/cation transporter), member 15 Neighboring gene STARR-seq mESC enhancer starr_08552 Neighboring gene STARR-seq mESC enhancer starr_08553 Neighboring gene nescient helix loop helix 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1) 

    General gene information

    Markers

    Clone Names

    • MGC47256

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172295.4NP_758499.3  protein mab-21-like 3

      See identical proteins and their annotated locations for NP_758499.3

      Status: VALIDATED

      Source sequence(s)
      AK161057, BB008605, CN663841
      Consensus CDS
      CCDS17684.1
      UniProtKB/Swiss-Prot
      Q3TKM3, Q8CE43, Q8CI17
      Related
      ENSMUSP00000059212.5, ENSMUST00000061831.11
      Conserved Domains (1) summary
      pfam03281
      Location:125418
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      101720392..101743601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011240120.4XP_011238422.1  protein mab-21-like 3 isoform X1

      See identical proteins and their annotated locations for XP_011238422.1

      UniProtKB/Swiss-Prot
      Q3TKM3, Q8CE43, Q8CI17
      Related
      ENSMUSP00000112730.2, ENSMUST00000118411.2
      Conserved Domains (1) summary
      pfam03281
      Location:125418
      Mab-21; Mab-21 protein