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    HMGB2 high mobility group box 2 [ Chrysemys picta bellii (western painted turtle) ]

    Gene ID: 101939564, updated on 6-Jun-2024

    Summary

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    Gene symbol
    HMGB2
    Gene description
    high mobility group box 2
    See related
    Ensembl:ENSCPBG00000002686
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysemys picta bellii (sub-species: bellii)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Chrysemys
    Also known as
    HMG-2
    Orthologs
    human mouse all
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    Genomic context

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    See HMGB2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_05 current ASM1138683v2 (GCF_011386835.1) 5 NC_088795.1 (73938137..73940817, complement)
    102 previous assembly Chrysemys_picta_bellii-3.0.3 (GCF_000241765.3) Unplaced Scaffold NW_007281377.1 (5415087..5417647, complement)

    Chromosome 5 - NC_088795.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC122172351 Neighboring gene uncharacterized LOC101938927 Neighboring gene uncharacterized LOC135983682 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC101939836 Neighboring gene Sin3A associated protein 30

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding, bending IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011386835.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1138683v2

    Genomic

    1. NC_088795.1 Reference ASM1138683v2

      Range
      73938137..73940817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005300049.5 → XP_005300106.2  high mobility group protein B2

    Nucleotide Protein
    Heading Accession and Version

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