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    LOC100313585 cytochrome P450-26 [ Saccoglossus kowalevskii ]

    Gene ID: 100313585, updated on 19-Oct-2023

    Summary

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    Gene symbol
    LOC100313585
    Gene description
    cytochrome P450-26
    See related
    EnsemblRapid:LOC100313585
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccoglossus kowalevskii
    Lineage
    Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC100313585 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003124935.1 (25314..28802, complement)

    NW_003124935.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 26A1-like Neighboring gene dysferlin-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003124935 unplaced scaffold reference Skow_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytochrome P450-26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001168052.1 → NP_001161524.1  cytochrome P450-26

      See identical proteins and their annotated locations for NP_001161524.1

      Status: PROVISIONAL

      Source sequence(s)
      GU075972
      UniProtKB/TrEMBL
      D1LWZ5
      Related
      NP_001161524.1, NM_001168052.1
      Conserved Domains (1) summary
      cl12078
      Location:36 → 478
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Skow_1.1 Primary Assembly

    Genomic

    1. NW_003124935.1 Reference Skow_1.1 Primary Assembly

      Range
      25314..28802 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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