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    HLTF helicase like transcription factor [ Aotus nancymaae (Ma's night monkey) ]

    Gene ID: 105706608, updated on 19-Apr-2024

    Summary

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    Gene symbol
    HLTF
    Gene description
    helicase like transcription factor
    See related
    Ensembl:ENSANAG00000036474
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aotus nancymaae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
    Orthologs
    human mouse all
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    Genomic context

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    See HLTF in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988431.1 (42565730..42618121, complement)
    101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018490409.1 (5753785..5806229)

    NW_026988431.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A3 Neighboring gene glycogenin 1 Neighboring gene ceruloplasmin Neighboring gene HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 Neighboring gene ceruloplasmin-like Neighboring gene ADP-ribosylation factor 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    helicase-like transcription factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Genomic

    1. NW_026988431.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

      Range
      42565730..42618121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012437115.2 → XP_012292538.2  helicase-like transcription factor isoform X4

    2. XM_012437112.3 → XP_012292535.2  helicase-like transcription factor isoform X2

    3. XM_012437114.2 → XP_012292537.2  helicase-like transcription factor isoform X3

    4. XM_012437113.3 → XP_012292536.2  helicase-like transcription factor isoform X3

    5. XM_021669561.2 → XP_021525236.2  helicase-like transcription factor isoform X1

    6. XM_021669560.2 → XP_021525235.2  helicase-like transcription factor isoform X1

    7. XM_021669559.2 → XP_021525234.2  helicase-like transcription factor isoform X1

    Nucleotide Protein
    Heading Accession and Version

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