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    PPL_05123 hypothetical protein [ Polysphondylium pallidum PN500 ]

    Gene ID: 31360609, updated on 16-Nov-2023

    Summary

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    Gene symbol
    PPL_05123
    Gene description
    hypothetical protein
    Locus tag
    PPL_05123
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Polysphondylium pallidum PN500 (strain: PN500)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium
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    Genomic context

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    See PPL_05123 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_008805067.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene glutamate-tRNA ligase Neighboring gene short-chain dehydrogenase/reductase family protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008805067.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication. Heidel AJ, et al. Genome Res, 2011 Nov. PMID 21757610, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_008805067.1 Reference assembly

      Range
      174383..175594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020576019.1 → XP_020434008.1  hypothetical protein PPL_05123 [Polysphondylium pallidum PN500]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D3B9H9
      Conserved Domains (2) summary
      pfam07653
      Location:228 → 280
      SH3_2; Variant SH3 domain
      cl26386
      Location:25 → 167
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    Nucleotide Protein
    Heading Accession and Version