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    AGOS_AGL066W AGL066Wp [ Eremothecium gossypii ATCC 10895 ]

    Gene ID: 4622899, updated on 16-Nov-2023

    Summary

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    Gene symbol
    AGOS_AGL066W
    Gene description
    AGL066Wp
    Locus tag
    AGOS_AGL066W
    Gene type
    protein coding
    RNA name
    AGL066Wp
    RefSeq status
    PROVISIONAL
    Organism
    Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
    Old locus tag
    AGL066W
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    Genomic context

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    See AGOS_AGL066W in Genome Data Viewer
    Location:
    chromosome: VII
    Exon count:
    1
    Sequence:
    Chromosome: VII; NC_005788.4 (901626..902978)

    Chromosome VII - NC_005788.4Genomic Context describing neighboring genes Neighboring gene AGL068Wp Neighboring gene AGL067Wp Neighboring gene AGL065Cp Neighboring gene AGL064Wp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005788.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA threonylcarbamoyladenosine dehydratase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-like modifier activating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cyclic threonylcarbamoyladenosine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    AGL066Wp
    NP_986600.2
    • Syntenic homolog of Saccharomyces cerevisiae YKL027W and YHR003C

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005788.4 Reference assembly

      Range
      901626..902978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_211662.2 → NP_986600.2  AGL066Wp [Eremothecium gossypii ATCC 10895]

      See identical proteins and their annotated locations for NP_986600.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q750M3
      Conserved Domains (2) summary
      COG1179
      Location:63 → 328
      TcdA; tRNA A37 threonylcarbamoyladenosine dehydratase [Translation, ribosomal structure and biogenesis]
      cd00755
      Location:76 → 317
      YgdL_like; Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like ...
    Nucleotide Protein
    Heading Accession and Version

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