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    RpS21 ribosomal protein S21 [ Drosophila mojavensis ]

    Gene ID: 6578076, updated on 22-May-2024

    Summary

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    Gene symbol
    RpS21
    Gene description
    ribosomal protein S21
    Locus tag
    Dmoj_GI19989
    See related
    EnsemblRapid:LOC6578076
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mojavensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    oho23B; GI19989; GI19989-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See RpS21 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318872.1 (4014801..4015448, complement)
    101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979113.1 (28929008..28929645, complement)

    NW_025318872.1Genomic Context describing neighboring genes Neighboring gene protein pelota Neighboring gene mitochondrial distribution and morphology protein 34 Neighboring gene ankyrin repeat domain-containing protein 29 Neighboring gene NHP2-like protein 1 hoip Neighboring gene uncharacterized LOC6578087 Neighboring gene bromodomain-containing protein DDB_G0280777

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S21
    Names
    Dmoj\GI19989
    Dmoj\GI19989-PA
    Overgrown hematopoietic organs at 23B
    dmoj_GLEANR_488

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815372v1

    Genomic

    1. NW_025318872.1 Reference ASM1815372v1

      Range
      4014801..4015448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044009161.1 → XP_043865096.1  40S ribosomal protein S21 isoform X1

      Related
      XP_043865096.1, XM_044009161.1

    2. XM_002003962.4 → XP_002003998.1  40S ribosomal protein S21 isoform X2

      See identical proteins and their annotated locations for XP_002003998.1

      UniProtKB/Swiss-Prot
      B4KIE3
      Related
      XP_002003998.1, XM_002003962.4
      Conserved Domains (1) summary
      pfam01249
      Location:1 → 79
      Ribosomal_S21e; Ribosomal protein S21e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4KIE3.1 GenPept UniProtKB/Swiss-Prot:B4KIE3

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