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    CUZD1 CUB and zona pellucida like domains 1 [ Homo sapiens (human) ]

    Gene ID: 50624, updated on 2-Nov-2024

    Summary

    Official Symbol
    CUZD1provided by HGNC
    Official Full Name
    CUB and zona pellucida like domains 1provided by HGNC
    Primary source
    HGNC:HGNC:17937
    See related
    Ensembl:ENSG00000138161 MIM:616644; AllianceGenome:HGNC:17937
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ERG1; ERG-1; UO-44; ITMAP1
    Summary
    Predicted to be involved in trypsinogen activation. Located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward pancreas (RPKM 310.9) See more
    Orthologs
    NEW
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    Genomic context

    See CUZD1 in Genome Data Viewer
    Location:
    10q26.13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (122832158..122845857, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (123707147..123720845, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (124591674..124605373, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527221-124527722 Neighboring gene deleted in malignant brain tumors 1 like 1 (pseudogene) Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124527723-124528222 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:124539143-124539651 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:124556394-124557593 Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene FAM24B-CUZD1 readthrough Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:124605161-124605662 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:124605663-124606162 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:124606229-124607110 Neighboring gene Sharpr-MPRA regulatory region 14360 Neighboring gene family with sequence similarity 24 member B Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:124635306-124635826 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:124635827-124636346 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:124644309-124644439 Neighboring gene C10orf88B (pseudogene) Neighboring gene Sharpr-MPRA regulatory region 13232 Neighboring gene family with sequence similarity 24 member A

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Readthrough FAM24B-CUZD1

    Readthrough gene: FAM24B-CUZD1, Included gene: FAM24B

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in trypsinogen activation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in cell surface IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in zymogen granule membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    CUB and zona pellucida-like domain-containing protein 1
    Names
    CUB and ZP domain-containing protein 1
    estrogen regulated gene 1
    transmembrane protein UO-44

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022034.6NP_071317.2  CUB and zona pellucida-like domain-containing protein 1 precursor

      See identical proteins and their annotated locations for NP_071317.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1), also known as UO-44D, represents the longer transcript and encodes the supported protein.
      Source sequence(s)
      AY260047
      Consensus CDS
      CCDS7631.1
      UniProtKB/Swiss-Prot
      A8K080, B2RN93, D3DRE5, Q7Z660, Q7Z661, Q86SG1, Q86UP5, Q86UP6, Q9HAR7
      UniProtKB/TrEMBL
      B4DUY8
      Related
      ENSP00000376540.1, ENST00000392790.6
      Conserved Domains (3) summary
      smart00042
      Location:53143
      CUB; Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein
      cd00041
      Location:154264
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      pfam00100
      Location:277517
      Zona_pellucida; Zona pellucida-like domain

    RNA

    1. NR_037912.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2), also known as UO-44C, lacks an alternate exon in the 5' region, compared to variant 1. This variant is represented as non-coding because the use of the supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AY260049
      Related
      ENST00000368901.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      122832158..122845857 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      123707147..123720845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)