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    PAS_chr2-2_0196 Protein required for cell viability [ Komagataella phaffii GS115 ]

    Gene ID: 8198771, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_chr2-2_0196
    Gene description
    Protein required for cell viability
    Locus tag
    PAS_chr2-2_0196
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr2-2_0196 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (2015829..2017922, complement)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Hypothetical protein Neighboring gene Tyrosine phosphatase that plays a role in actin filament organization and endocytosis Neighboring gene uncharacterized protein Neighboring gene Cyclin-like component of the RNA polymerase II holoenzyme

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables U3 snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein required for cell viability

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      2015829..2017922 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002491959.1 → XP_002492004.1  Protein required for cell viability [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002492004.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      C4R2K0
      UniProtKB/TrEMBL
      F2QR73
      Conserved Domains (1) summary
      pfam06862
      Location:218 → 696
      UTP25; Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C4R2K0.1

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