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    Clta clathrin light chain A [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100734541, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Clta
    Gene description
    clathrin light chain A
    See related
    Ensembl:ENSCPOG00000013495
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Clta in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (192040141..192060385, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176392.1 (16624364..16644623)

    NW_026947484.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106027876 Neighboring gene glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase Neighboring gene large ribosomal subunit protein eL37-like Neighboring gene Y+L amino acid transporter 2-like Neighboring gene calicin-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin heavy chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in clathrin-dependent endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of clathrin coat of coated pit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of clathrin coat of trans-Golgi network vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic endocytic zone cytoplasmic component IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    clathrin light chain A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947484.1 Reference mCavPor4.1

      Range
      192040141..192060385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023565521.2 → XP_023421289.1  clathrin light chain A isoform X2

      UniProtKB/TrEMBL
      A0A286XEP9
      Related
      ENSCPOP00000023828.1
      Conserved Domains (1) summary
      pfam01086
      Location:1 → 225
      Clathrin_lg_ch; Clathrin light chain

    2. XM_003470871.5 → XP_003470919.1  clathrin light chain A isoform X1

      UniProtKB/TrEMBL
      A0A286XZ77
      Related
      ENSCPOP00000030756.1
      Conserved Domains (1) summary
      pfam01086
      Location:1 → 241
      Clathrin_lg_ch; Clathrin light chain

    3. XM_003470874.5 → XP_003470922.1  clathrin light chain A isoform X3

      UniProtKB/TrEMBL
      H0VNV2
      Related
      ENSCPOP00000012151.3
      Conserved Domains (1) summary
      pfam01086
      Location:1 → 223
      Clathrin_lg_ch; Clathrin light chain

    4. XM_003470873.5 → XP_003470921.1  clathrin light chain A isoform X4

      UniProtKB/TrEMBL
      A0A286XQF8
      Related
      ENSCPOP00000027609.1
      Conserved Domains (1) summary
      pfam01086
      Location:1 → 211
      Clathrin_lg_ch; Clathrin light chain
    Nucleotide Protein
    Heading Accession and Version

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