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    LOC100878207 multidrug resistance-associated protein 4-like [ Megachile rotundata (alfalfa leafcutting bee) ]

    Gene ID: 100878207, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC100878207
    Gene description
    multidrug resistance-associated protein 4-like
    See related
    EnsemblRapid:LOC100878207
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megachile rotundata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Megachile
    Orthologs
    honey bee all
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    Genomic context

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    See LOC100878207 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current MROT_1.0 (GCF_000220905.1) Unplaced Scaffold NW_003797055.1 (1158211..1171836)

    NW_003797055.1Genomic Context describing neighboring genes Neighboring gene probable H/ACA ribonucleoprotein complex subunit 1-like protein Neighboring gene Serine/threonine-protein kinase polo Neighboring gene multidrug resistance-associated protein 4-like Neighboring gene uncharacterized LOC105661859 Neighboring gene uncharacterized LOC100878164

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003797055.1 Unplaced Scaffold Reference MROT_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multidrug resistance-associated protein 4-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megachile rotundata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MROT_1.0

    Genomic

    1. NW_003797055.1 Reference MROT_1.0

      Range
      1158211..1171836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003699242.2 → XP_003699290.1  multidrug resistance-associated protein 4-like isoform X1

      Related
      XP_003699290.1, XM_003699242.2
      Conserved Domains (4) summary
      cd03244
      Location:1133 → 1352
      ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
      cd03250
      Location:484 → 684
      ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
      TIGR01271
      Location:11 → 1373
      CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
      cl00549
      Location:789 → 1071
      ABC_membrane; ABC transporter transmembrane region

    2. XM_012280161.1 → XP_012135551.1  multidrug resistance-associated protein 4-like isoform X2

      Related
      XP_012135551.1, XM_012280161.1
      Conserved Domains (4) summary
      cd03244
      Location:1051 → 1270
      ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
      cd03250
      Location:402 → 602
      ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
      TIGR01271
      Location:8 → 1291
      CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
      cl00549
      Location:707 → 989
      ABC_membrane; ABC transporter transmembrane region
    Nucleotide Protein
    Heading Accession and Version

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