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    RPS9B ribosomal 40S subunit protein S9B [ Saccharomyces cerevisiae S288C ]

    Gene ID: 852487, updated on 7-Jul-2024

    Summary

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    Gene symbol
    RPS9B
    Gene description
    ribosomal 40S subunit protein S9B
    Primary source
    FungiDB:YBR189W
    Locus tag
    YBR189W
    See related
    SGD:S000000393; AllianceGenome:SGD:S000000393; VEuPathDB:YBR189W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    RPS13A; SUP46
    Summary
    A structural constituent of ribosome. Involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and positive regulation of translational fidelity. Part of cytosolic small ribosomal subunit and small-subunit processome. Orthologous to human RPS9 (ribosomal protein S9). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See RPS9B in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_001134.8 (604508..605508)

    Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene putative ribosome biosynthesis protein GDT1 Neighboring gene Ntc20p Neighboring gene ribosomal 60S subunit protein L21A Neighboring gene Rim2p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001134.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Altered ribosomal protein S11 from the SUP46 suppressor of yeast. Ishiguro J, et al. J Mol Biol, 1981 Apr 15. PMID 7031259
    2. Misreading of the ribosomal suppressor SUP46 due to an altered 40 S subunit in yeast. Masurekar M, et al. J Mol Biol, 1981 Apr 15. PMID 7031258
    3. Serine insertion caused by the ribosomal suppressor SUP46 in yeast. Ono BI, et al. J Mol Biol, 1981 Apr 15. PMID 6273576
    4. Introns regulate the production of ribosomal proteins by modulating splicing of duplicated ribosomal protein genes. Petibon C, et al. Nucleic Acids Res, 2016 May 5. PMID 26945043, Free PMC Article
    5. Genome-wide polysomal analysis of a yeast strain with mutated ribosomal protein S9. Pnueli L, et al. BMC Genomics, 2007 Aug 21. PMID 17711575, Free PMC Article

    See all (121) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in positive regulation of translational fidelity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in ribosomal small subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of 90S preribosome HDA PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic small ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in organelle IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of small-subunit processome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal 40S subunit protein S9B
    NP_009748.3
    • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001134.8 Reference assembly

      Range
      604508..605508
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178537.3 → NP_009748.3  TPA: ribosomal 40S subunit protein S9B [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_009748.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VQI4, P05755
      UniProtKB/TrEMBL
      N1P8D7
      Conserved Domains (1) summary
      PTZ00155
      Location:1 → 180
      PTZ00155; 40S ribosomal protein S9; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P05755.4

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