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    LOC103182175 heterogeneous nuclear ribonucleoprotein H3 (2H9) [ Callorhinchus milii (elephant shark) ]

    Gene ID: 103182175, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103182175
    Gene description
    heterogeneous nuclear ribonucleoprotein H3 (2H9)
    See related
    Ensembl:ENSCMIG00000009618
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callorhinchus milii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
    Also known as
    hnrnph3
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    Genomic context

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    See LOC103182175 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704748.1 (9307172..9319110)
    100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890056.1 (14336659..14348007, complement)

    NW_024704748.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E family member 1c Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene phenazine biosynthesis-like domain-containing protein 1 Neighboring gene stromal cell-derived factor 1-like Neighboring gene chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
    2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein H3
    Names
    heterogeneous nuclear ribonucleoprotein H-like protein
    heterogeneous nuclear ribonucleoprotein H2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IMCB_Cmil_1.0 Primary Assembly

    Genomic

    1. NW_024704748.1 Reference IMCB_Cmil_1.0 Primary Assembly

      Range
      9307172..9319110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042336606.1 → XP_042192540.1  heterogeneous nuclear ribonucleoprotein H3 isoform X3

      Conserved Domains (1) summary
      cl17169
      Location:197 → 271
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_042336604.1 → XP_042192538.1  heterogeneous nuclear ribonucleoprotein H3 isoform X1

      Conserved Domains (1) summary
      cl17169
      Location:279 → 353
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_042336605.1 → XP_042192539.1  heterogeneous nuclear ribonucleoprotein H3 isoform X2

      UniProtKB/TrEMBL
      A0A4W3HX53
      Conserved Domains (1) summary
      cl17169
      Location:279 → 353
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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