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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001256115.1 → NP_001243044.1 SUN domain-containing protein 1 isoform 2
See identical proteins and their annotated locations for NP_001243044.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AK036187, AV239459, CK389844
- Consensus CDS
-
CCDS57395.1
- UniProtKB/Swiss-Prot
-
Q9D666
- Related
- ENSMUSP00000106508.3, ENSMUST00000110884.9
- Conserved Domains (2) summary
-
- pfam07738
Location:740 → 874
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 378
- MRP; Mitochondrial RNA binding protein MRP
-
NM_001256116.2 → NP_001243045.1 SUN domain-containing protein 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the coding region, compared to variant 1. The resulting isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AC125065
- Consensus CDS
-
CCDS57396.1
- UniProtKB/Swiss-Prot
-
Q9D666
- Related
- ENSMUSP00000077756.7, ENSMUST00000078690.13
- Conserved Domains (2) summary
-
- pfam07738
Location:713 → 847
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 351
- MRP; Mitochondrial RNA binding protein MRP
-
NM_001256117.1 → NP_001243046.1 SUN domain-containing protein 1 isoform 4
See identical proteins and their annotated locations for NP_001243046.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks three consecutive exons in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (4) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AK014585, AV239459, CK389844
- Consensus CDS
-
CCDS57397.1
- UniProtKB/Swiss-Prot
-
Q9D666
- Related
- ENSMUSP00000106507.3, ENSMUST00000110883.9
- Conserved Domains (2) summary
-
- pfam07738
Location:654 → 788
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 292
- MRP; Mitochondrial RNA binding protein MRP
-
NM_001256118.1 → NP_001243047.1 SUN domain-containing protein 1 isoform 5
See identical proteins and their annotated locations for NP_001243047.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks four consecutive exons in the coding region but maintains the reading frame, compared to variant 1. The resulting isoform (5) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AK160281, BQ551727, HQ402597
- Consensus CDS
-
CCDS57398.1
- UniProtKB/Swiss-Prot
-
Q9D666
- Related
- ENSMUSP00000106506.2, ENSMUST00000110882.8
- Conserved Domains (2) summary
-
- pfam07738
Location:621 → 755
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 259
- MRP; Mitochondrial RNA binding protein MRP
-
NM_001359494.1 → NP_001346423.1 SUN domain-containing protein 1 isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks an in-frame exon in the coding region and uses an alternate in-frame splice junction, compared to variant 1. The resulting isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AC125065
- Conserved Domains (3) summary
-
- pfam07738
Location:712 → 846
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 351
- MRP; Mitochondrial RNA binding protein MRP
- cl25732
Location:428 → 579
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001359496.1 → NP_001346425.1 SUN domain-containing protein 1 isoform 7
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) lacks two alternate in-frame exons, compared to variant 1. The resulting isoform (7) is shorter than isoform 1.
- Source sequence(s)
-
AC125065
- Conserved Domains (3) summary
-
- pfam07738
Location:676 → 810
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:73 → 314
- MRP; Mitochondrial RNA binding protein MRP
- cl25732
Location:385 → 564
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_024451.2 → NP_077771.1 SUN domain-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_077771.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AK160281, AK167686, BY036585
- Consensus CDS
-
CCDS19804.1
- UniProtKB/Swiss-Prot
- D3Z0V9, Q3TIW3, Q3TV96, Q6B4H0, Q80SU8, Q8BZ99, Q99P23, Q9D666
- Related
- ENSMUSP00000056655.8, ENSMUST00000058716.14
- Conserved Domains (5) summary
-
- COG1196
Location:486 → 665
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam07738
Location:777 → 911
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:63 → 415
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:709 → 734
- Sun2_CC2; SUN2 coiled coil domain 2
- cd21439
Location:553 → 606
- SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000071.7 Reference GRCm39 C57BL/6J
- Range
-
139186313..139235594
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036165598.1 → XP_036021491.1 SUN domain-containing protein 1 isoform X22
- UniProtKB/TrEMBL
-
Q3TSM1
- Related
- ENSMUSP00000098086.4, ENSMUST00000100517.10
- Conserved Domains (1) summary
-
- pfam09387
Location:92 → 253
- MRP; Mitochondrial RNA binding protein MRP
-
XM_017321156.3 → XP_017176645.1 SUN domain-containing protein 1 isoform X1
- Conserved Domains (4) summary
-
- pfam07738
Location:815 → 949
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:543 → 706
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 259
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:747 → 772
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321157.3 → XP_017176646.1 SUN domain-containing protein 1 isoform X2
- Conserved Domains (4) summary
-
- pfam07738
Location:814 → 948
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:543 → 705
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 259
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:746 → 771
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_036165596.1 → XP_036021489.1 SUN domain-containing protein 1 isoform X8
- Conserved Domains (4) summary
-
- pfam07738
Location:777 → 911
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:92 → 416
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:709 → 734
- Sun2_CC2; SUN2 coiled coil domain 2
- cd21439
Location:554 → 605
- SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins
-
XM_017321162.3 → XP_017176651.1 SUN domain-containing protein 1 isoform X6
- Conserved Domains (4) summary
-
- pfam07738
Location:778 → 912
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:506 → 669
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 416
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:710 → 735
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321164.3 → XP_017176653.1 SUN domain-containing protein 1 isoform X10
- Conserved Domains (4) summary
-
- pfam07738
Location:756 → 890
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:484 → 647
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 394
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:688 → 713
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_030254889.2 → XP_030110749.1 SUN domain-containing protein 1 isoform X3
- Conserved Domains (4) summary
-
- pfam07738
Location:805 → 939
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:534 → 696
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 250
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:737 → 762
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321165.3 → XP_017176654.1 SUN domain-containing protein 1 isoform X11
- Conserved Domains (4) summary
-
- pfam07738
Location:751 → 885
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:479 → 642
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 389
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:683 → 708
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321168.3 → XP_017176657.1 SUN domain-containing protein 1 isoform X13
- Conserved Domains (4) summary
-
- pfam07738
Location:714 → 848
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:442 → 605
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 352
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:646 → 671
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321163.3 → XP_017176652.1 SUN domain-containing protein 1 isoform X9
- Conserved Domains (4) summary
-
- pfam07738
Location:768 → 902
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:497 → 659
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 407
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:700 → 725
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_030254894.2 → XP_030110754.1 SUN domain-containing protein 1 isoform X16
- Conserved Domains (4) summary
-
- pfam07738
Location:691 → 825
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:420 → 582
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 330
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:623 → 648
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_030254890.2 → XP_030110750.1 SUN domain-containing protein 1 isoform X12
- Conserved Domains (4) summary
-
- pfam07738
Location:747 → 881
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:475 → 638
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 385
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:679 → 704
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321170.3 → XP_017176659.1 SUN domain-containing protein 1 isoform X15
- Conserved Domains (4) summary
-
- pfam07738
Location:692 → 826
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:420 → 583
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 330
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:624 → 649
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321171.3 → XP_017176660.1 SUN domain-containing protein 1 isoform X18
- Conserved Domains (4) summary
-
- pfam07738
Location:659 → 793
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:387 → 550
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 297
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:591 → 616
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321169.3 → XP_017176658.1 SUN domain-containing protein 1 isoform X14
- Conserved Domains (4) summary
-
- pfam07738
Location:704 → 838
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:433 → 595
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 343
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:636 → 661
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_036165597.1 → XP_036021490.1 SUN domain-containing protein 1 isoform X17
- Conserved Domains (4) summary
-
- pfam07738
Location:682 → 816
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:92 → 321
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:614 → 639
- Sun2_CC2; SUN2 coiled coil domain 2
- cd21439
Location:459 → 510
- SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins
-
XM_006504767.4 → XP_006504830.1 SUN domain-containing protein 1 isoform X19
- Conserved Domains (4) summary
-
- pfam07738
Location:650 → 784
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:378 → 541
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:102 → 288
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:582 → 607
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_036165595.1 → XP_036021488.1 SUN domain-containing protein 1 isoform X7
- UniProtKB/Swiss-Prot
- D3Z0V9, Q3TIW3, Q3TV96, Q6B4H0, Q80SU8, Q8BZ99, Q99P23, Q9D666
- Conserved Domains (5) summary
-
- COG1196
Location:486 → 665
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam07738
Location:777 → 911
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam09387
Location:63 → 415
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:709 → 734
- Sun2_CC2; SUN2 coiled coil domain 2
- cd21439
Location:553 → 606
- SUN1_cc1; coiled-coil domain 1 of SUN domain-containing protein 1 and similar proteins
-
XM_017321160.2 → XP_017176649.1 SUN domain-containing protein 1 isoform X5
- Conserved Domains (4) summary
-
- pfam07738
Location:786 → 920
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:514 → 677
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:73 → 230
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:718 → 743
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321159.2 → XP_017176648.1 SUN domain-containing protein 1 isoform X5
- Conserved Domains (4) summary
-
- pfam07738
Location:786 → 920
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:514 → 677
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:73 → 230
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:718 → 743
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321161.2 → XP_017176650.1 SUN domain-containing protein 1 isoform X5
- Conserved Domains (4) summary
-
- pfam07738
Location:786 → 920
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:514 → 677
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:73 → 230
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:718 → 743
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_030254895.2 → XP_030110755.1 SUN domain-containing protein 1 isoform X20
- Conserved Domains (4) summary
-
- pfam07738
Location:629 → 763
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:358 → 520
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:82 → 268
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:561 → 586
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_030254897.2 → XP_030110757.1 SUN domain-containing protein 1 isoform X21
- Conserved Domains (4) summary
-
- pfam07738
Location:620 → 754
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:349 → 511
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:73 → 259
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:552 → 577
- Sun2_CC2; SUN2 coiled coil domain 2
-
XM_017321158.1 → XP_017176647.1 SUN domain-containing protein 1 isoform X4
- Conserved Domains (4) summary
-
- pfam07738
Location:795 → 929
- Sad1_UNC; Sad1 / UNC-like C-terminal
- pfam07888
Location:523 → 686
- CALCOCO1; Calcium binding and coiled-coil domain (CALCOCO1) like
- pfam09387
Location:82 → 239
- MRP; Mitochondrial RNA binding protein MRP
- pfam18580
Location:727 → 752
- Sun2_CC2; SUN2 coiled coil domain 2