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    R05D7.3 Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 173095, updated on 18-Sep-2024

    Summary

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    Official Symbol
    R05D7.3
    Official Full Name
    Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein
    Primary source
    WormBase:WBGene00011028
    Locus tag
    CELE_R05D7.3
    See related
    AllianceGenome:WB:WBGene00011028
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including TMEM200A (transmembrane protein 200A). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See R05D7.3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (12168175..12177782, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF3278 domain-containing protein Neighboring gene SPK domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene sn-1-specific diacylglycerol lipase ABHD11 Neighboring gene Nematode Specific Peptide family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein
    NP_001263528.1
    • Confirmed by transcript evidence
    NP_001263529.1
    • Confirmed by transcript evidence
    NP_001263530.1
    • Confirmed by transcript evidence
    NP_001364813.1
    • Confirmed by transcript evidence
    NP_001368152.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      12168175..12177782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001377658.2 → NP_001364813.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7RNM1
      Conserved Domains (1) summary
      pfam10177
      Location:1 → 70
      DUF2371; Uncharacterized conserved protein (DUF2371)

    2. NM_001381226.1 → NP_001368152.1  Transmembrane protein 200C [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7S160
      Conserved Domains (1) summary
      pfam10177
      Location:63 → 145
      DUF2371; Uncharacterized conserved protein (DUF2371)

    3. NM_001276599.3 → NP_001263528.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263528.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7SF94
      Conserved Domains (1) summary
      pfam10177
      Location:29 → 111
      DUF2371; Uncharacterized conserved protein (DUF2371)

    4. NM_001276600.3 → NP_001263529.1  Transmembrane protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263529.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7SA63
      Conserved Domains (1) summary
      pfam10177
      Location:21 → 103
      DUF2371; Uncharacterized conserved protein (DUF2371)

    5. NM_001276601.3 → NP_001263530.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263530.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      J7SEZ9
      Conserved Domains (1) summary
      pfam10177
      Location:12 → 94
      DUF2371; Uncharacterized conserved protein (DUF2371)
    Nucleotide Protein
    Heading Accession and Version

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