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    LOC542505 peroxidase 3 [ Zea mays ]

    Gene ID: 542505, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC542505
    Gene description
    peroxidase 3
    Locus tag
    ZEAMMB73_Zm00001d037547
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    pox3; GRMZM2G135108
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    Genomic context

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    See LOC542505 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (135796748..135798410)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (128952495..128954041)

    Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene aspartic proteinase oryzasin-1 Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene myosin-2 heavy chain-like Neighboring gene uncharacterized LOC109940620 Neighboring gene uncharacterized LOC100273479

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterisation of maize peroxidases having differential patterns of mRNA accumulation in relation to lignifying tissues. de Obeso M, et al. Gene, 2003 Apr 24. PMID 12727355
    2. Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. Vega-Arreguín JC, et al. BMC Genomics, 2009 Jul 6. PMID 19580677, Free PMC Article
    3. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type cell wall IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasmodesma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxidase 5
    Names
    QBF2g08
    Zmpox3
    gnp_QBF2g08
    gpm452
    guaiacol peroxidase3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      135796748..135798410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008651143.4 → XP_008649365.1  peroxidase 5

      See identical proteins and their annotated locations for XP_008649365.1

      UniProtKB/TrEMBL
      A0A1D6LYW3, A0A3L6E8Q5
      Conserved Domains (1) summary
      cd00693
      Location:27 → 337
      secretory_peroxidase; Horseradish peroxidase and related secretory plant peroxidases
    Nucleotide Protein
    Heading Accession and Version

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