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    DFA_11547 uncharacterized protein [ Cavenderia fasciculata ]

    Gene ID: 14866554, updated on 28-Dec-2023

    Summary

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    Gene symbol
    DFA_11547
    Gene description
    uncharacterized protein
    Locus tag
    DFA_11547
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cavenderia fasciculata (isolate: SH3)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
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    Genomic context

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    See DFA_11547 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    17

    NW_004457624.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kinesin family member 3 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_004457624.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables acyl-CoA oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables fatty acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_004457624.1 Reference assembly

      Range
      1384217..1393845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004350443.1 → XP_004350494.1  uncharacterized protein DFA_11547 [Cavenderia fasciculata]

      See identical proteins and their annotated locations for XP_004350494.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F4QDI9
      Conserved Domains (3) summary
      COG1960
      Location:100 → 508
      CaiA; Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]
      pfam02207
      Location:918 → 987
      zf-UBR; Putative zinc finger in N-recognin (UBR box)
      cl09933
      Location:90 → 667
      ACAD; Acyl-CoA dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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