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    EQW00_RS08655 XRE family transcriptional regulator [ Staphylococcus epidermidis ]

    Gene ID: 50019065, updated on 10-Oct-2024

    Summary

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    Gene symbol
    EQW00_RS08655
    Gene description
    XRE family transcriptional regulator
    Locus tag
    EQW00_RS08655
    Gene type
    protein coding
    Organism
    Staphylococcus epidermidis (strain: ATCC 14990, culture-collection: ATCC:14990, type-material: type strain of Staphylococcus epidermidis)
    Lineage
    Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
    Old locus tag
    EQW00_08660
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    Genomic context

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    NZ_CP035288.1Genomic Context describing neighboring genes Neighboring gene spermidine/putrescine ABC transporter substrate-binding protein Neighboring gene ABC transporter permease Neighboring gene ABC transporter permease Neighboring gene ABC transporter ATP-binding protein Neighboring gene UPF0223 family protein Neighboring gene dihydrolipoyl dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP035288.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Distinct clonal lineages and within-host diversification shape invasive Staphylococcus epidermidis populations. Both A, et al. PLoS Pathog, 2021 Feb. PMID 33544760, Free PMC Article
    2. Cupins: the most functionally diverse protein superfamily? Dunwell JM, et al. Phytochemistry, 2004 Jan. PMID 14697267
    3. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    XRE family transcriptional regulator

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP035288.1 Reference assembly

      Range
      1790537..1791076 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002439334.1 MULTISPECIES: XRE family transcriptional regulator [Staphylococcus]

      See identical proteins and their annotated locations for WP_002439334.1

      UniProtKB/TrEMBL
      A0A0H2VFS4, A0A2T4LK57, A0A9Q5JIZ2, A0AAN2TIK2, Q5HQ71
      Conserved Domains (2) summary
      cd00093
      Location:4 → 61
      HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
      cd02209
      Location:86 → 175
      cupin_XRE_C; XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain
    Nucleotide Protein
    Heading Accession and Version

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