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    ytpR YtpR family tRNA-binding protein [ Oenococcus oeni ]

    Gene ID: 75065628, updated on 30-Mar-2024

    Summary

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    Gene symbol
    ytpR
    Gene description
    YtpR family tRNA-binding protein
    Locus tag
    J3U91_RS03885
    Gene type
    protein coding
    Organism
    Oenococcus oeni (strain: AWRIB429)
    Lineage
    Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Oenococcus
    Old locus tag
    J3U91_00798
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    Genomic context

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    NZ_CP084701.1Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter permease Neighboring gene hypothetical protein Neighboring gene tRNA (guanosine(46)-N7)-methyltransferase TrmB Neighboring gene UDP-N-acetylmuramate--L-alanine ligase Neighboring gene Bax inhibitor-1/YccA family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP084701.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phenotype enhancement screen of a regulatory spx mutant unveils a role for the ytpQ gene in the control of iron homeostasis. Zuber P, et al. PLoS One, 2011. PMID 21949854, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    YtpR family tRNA-binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP084701.1 Reference assembly

      Range
      735115..735726
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_002819135.1 YtpR family tRNA-binding protein [Oenococcus oeni]

      See identical proteins and their annotated locations for WP_002819135.1

      UniProtKB/TrEMBL
      D3LA88, Q04EH9
      Conserved Domains (2) summary
      cd02796
      Location:86 → 191
      tRNA_bind_bactPheRS; tRNA-binding-domain-containing prokaryotic phenylalanly tRNA synthetase (PheRS) beta chain. PheRS aminoacylate phenylalanine transfer RNAs (tRNAphe). PheRSs belong structurally to class II aminoacyl tRNA synthetases (aaRSs) but, as they aminoacylate ...
      pfam14794
      Location:17 → 81
      DUF4479; Domain of unknown function (DUF4479)
    Nucleotide Protein
    Heading Accession and Version

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