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    ybeY rRNA maturation RNase YbeY [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1132396, updated on 27-Aug-2024

    Summary

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    Gene symbol
    ybeY
    Gene description
    rRNA maturation RNase YbeY
    Locus tag
    ATU_RS01720
    Gene type
    protein coding
    Organism
    Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_C_626; Atu0358
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    Genomic context

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    Location:
    chromosome: circular
    Sequence:
    Chromosome: circular; NC_003062.2 (352153..352659)

    Chromosome circular - NC_003062.2Genomic Context describing neighboring genes Neighboring gene tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB Neighboring gene PhoH family protein Neighboring gene hemolysin family protein Neighboring gene apolipoprotein N-acyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003062.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The RNase YbeY Is Vital for Ribosome Maturation, Stress Resistance, and Virulence of the Natural Genetic Engineer Agrobacterium tumefaciens. Möller P, et al. J Bacteriol, 2019 Jun 1. PMID 30885931, Free PMC Article
    2. The ybeY protein from Escherichia coli is a metalloprotein. Zhan C, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2005 Nov 1. PMID 16511207, Free PMC Article
    3. Conserved bacterial RNase YbeY plays key roles in 70S ribosome quality control and 16S rRNA maturation. Jacob AI, et al. Mol Cell, 2013 Feb 7. PMID 23273979, Free PMC Article
    4. Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing. Davies BW, et al. Mol Microbiol, 2010 Oct. PMID 20807199, Free PMC Article
    5. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The RNase YbeY is vital for ribosome maturation, stress resistance, and virulence in Agrobacterium tumefaciens.
      Title: The RNase YbeY Is Vital for Ribosome Maturation, Stress Resistance, and Virulence of the Natural Genetic Engineer Agrobacterium tumefaciens.
    Submit: New GeneRIF Correction

    General protein information

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    Preferred Names
    rRNA maturation RNase YbeY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003062.2 Reference assembly

      Range
      352153..352659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010970840.1 rRNA maturation RNase YbeY [Agrobacterium fabrum]

      See identical proteins and their annotated locations for WP_010970840.1

      UniProtKB/Swiss-Prot
      Q8UID9
      UniProtKB/TrEMBL
      A0A2W5EJU3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8UID9.2

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